Vibrio coralliilyticus RE98: IX92_03750
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Entry
IX92_03750 CDS
T03444
Name
(GenBank) RNA polymerase sigma 70
KO
K02405
RNA polymerase sigma factor FliA
Organism
vcy
Vibrio coralliilyticus RE98
Pathway
vcy02020
Two-component system
vcy02040
Flagellar assembly
vcy05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vcy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IX92_03750
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
IX92_03750
09142 Cell motility
02040 Flagellar assembly
IX92_03750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vcy03021
]
IX92_03750
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
vcy02035
]
IX92_03750
Transcription machinery [BR:
vcy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IX92_03750
Bacterial motility proteins [BR:
vcy02035
]
Flagellar system
Flagellar assembly proteins
Stator
IX92_03750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
UPF0122
HTH_23
HTH_10
GerE
Rv2175c_wHTH
MarR_2
UPF0175
Motif
Other DBs
NCBI-ProteinID:
AIW18204
UniProt:
A0A097QLX5
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All DBs
Position
1:824538..825272
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AA seq
244 aa
AA seq
DB search
MNKALTYDQYANQDSQRAFLEKYSVLVKRIAHHLLGRLPPSVQVEDLIQAGMIGLLEAQK
NYDGSKGASFETYAGIRIRGAMLDDIRRGDWVPRSVHKNSREISQAIAQLEGELNRDPTD
AEVAKRLEMSLEQYHSALTDINSSRLIGIDDLGVSEDAISHEDADEENIPFQGVADEYFR
TALVESIKSLPEREALVLSLYYDEELNLKEIGEVIGVSESRVSQILSQSMQRLRTKLSVW
TNND
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaggcattgacctatgaccaatacgcaaatcaagatagccagcgagcattttta
gaaaaatactcggtgctggtaaagcgcattgctcaccatttgctcgggcgattacctccg
agcgtacaggtcgaagacctaattcaagccggaatgatcggcttattagaagctcaaaag
aactacgacggcagtaaaggcgccagttttgaaacctatgctggcattcgcatccgtggt
gctatgcttgatgatatacgccgtggggattgggttccccgctcagtacacaaaaacagt
cgagaaatcagtcaggccattgcgcagttagaaggtgaactcaatcgggatccaaccgat
gcagaggtcgccaagcgcttagaaatgagccttgagcaataccatagtgcattaacggat
attaacagttctcgtctcattggtattgacgatttaggtgtgtcagaagatgcgatatcg
cacgaagatgctgacgaagaaaatatcccttttcagggcgtcgcagatgaatattttcgt
actgcactagtagaatcaattaaatcacttcctgaaagagaagctctagtactttcgctt
tattatgatgaagagttaaacttgaaggaaatcggcgaagttattggtgttagcgagtcg
cgcgttagccaaatactaagccaatcaatgcagcgtctacgcacaaagttgagtgtttgg
acaaataatgactaa
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