Vibrio coralliilyticus RE98: IX92_04215
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Entry
IX92_04215 CDS
T03444
Name
(GenBank) pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
vcy
Vibrio coralliilyticus RE98
Brite
KEGG Orthology (KO) [BR:
vcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vcy03009
]
IX92_04215
Enzymes [BR:
vcy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
IX92_04215
Ribosome biogenesis [BR:
vcy03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
IX92_04215
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF3603
Orexin
Motif
Other DBs
NCBI-ProteinID:
AIW18294
UniProt:
A0A7Y3Z1T4
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All DBs
Position
1:926006..926950
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AA seq
314 aa
AA seq
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MSEIRTKVQFVDIDEDMAGQRIDNFLRNQLKSIPKSMVYRILRKGEVRVNKKRIKAEYKL
KAGDLVRIPPVTIEEKQDEVAPSTKLNKVAELEHMIIHEDEHMLILNKPSGTAVHGGSGL
KFGAIEALRALRPQARFLELVHRIDRDTSGILLVAKKRSALRHLQAQFREKTVQKYYFAL
VMGQWKSSCKVVNAPLLKNEVNSIVRVSPQGKPSETRFKIIEKFAEATLIQASPITGRTH
QIRVHTQYTGHPIAWDDRYGDRRFDAYTGKVGLDRLFLHAANIKFKHPSNDEWMEVSAPM
EAKLEKALASLRKL
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaattagaacaaaagtccaatttgtcgatatcgacgaagatatggctggccag
cgtatcgataattttttacgcaaccaactgaaaagtatccctaaaagcatggtttatcgg
atcttgcgcaagggagaagtacgcgtaaacaaaaaacgaattaaagctgaatataaattg
aaggcgggggatttggtcagaattcctccagttacgattgaagagaagcaagacgaagtt
gcaccgagtaccaaactgaataaagtcgctgagctagaacatatgatcatccatgaagat
gaacatatgcttatcctcaataaaccttcgggcacggcagttcacggaggaagcgggctt
aaatttggtgctattgaagctttacgagcactgaggccgcaagctcgttttcttgagcta
gtgcatcgtattgatcgtgatacttcgggaatccttttggttgcgaaaaagcgctccgca
ctgcgtcatctgcaggcccagtttcgtgaaaaaaccgtgcagaaatactatttcgcattg
gtgatggggcagtggaagagtagttgcaaggtcgtaaacgcaccactattgaaaaatgaa
gtgaacagtatcgttcgcgtgagcccacagggtaagccttctgagacccgttttaagatt
attgaaaagtttgctgaggctactttgattcaggcgagcccaataacggggcgtacgcat
caaattcgtgtccatactcagtatactggtcatccaattgcttgggacgaccgttatggt
gatcgacgttttgatgcctacacaggaaaagttgggttagaccgactgtttcttcatgcc
gctaatattaaatttaaacatccatccaatgacgagtggatggaagtgagtgcgccaatg
gaagcaaagttggagaaggcgctagcgagtttacgtaagctgtaa
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