Vibrio coralliilyticus RE98: IX92_20410
Entry
IX92_20410 CDS
T03444
Definition
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
vcy
Vibrio coralliilyticus RE98
Pathway
vcy00473
D-Alanine metabolism
vcy00550
Peptidoglycan biosynthesis
vcy01100
Metabolic pathways
vcy01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
vcy00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00473 D-Alanine metabolism
IX92_20410
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
IX92_20410
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
IX92_20410
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vcy01011
]
IX92_20410
Enzymes [BR:
vcy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
IX92_20410
Peptidoglycan biosynthesis and degradation proteins [BR:
vcy01011
]
Precursor biosynthesis
Amino acid ligase
IX92_20410
SSDB
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp
ATPgrasp_ST
SfsA
Other DBs
NCBI-ProteinID:
AIW21375
LinkDB
Position
2:961098..962087
AA seq
329 aa
MANTTILLLCGGGSAEHEVSLVSADFVQSQLELTPDFEVIRVEMKPEGWYQGEQLVYLDT
NAGTLNSEVNATKLDFVVPCIHGFPGETGDIQSMLELTGIPYLGCGPEASTNSFNKITSK
LWYDALSIPNTPYIFLSENNKQAYDQSLAAFEQWDSVFVKAARQGSSVGCYKVTEKDQLQ
KAINDAFGYSDQVLVEKAVKPRELEVAAYEYKGQLHVTSPGEIKAPEDTFYSYEEKYSAD
SHSTTDVEATNLTDDQRLIIQQASEKVFKQMRLRHLSRIDFFLTPEGNVYLNEVNTFPGM
TPISMFPKMVEHSGLKFSEFLADCVKSSL
NT seq
990 nt
+upstream
nt +downstream
nt
atggcgaatacaacaattttactactttgtggcggcggttcggctgagcatgaagtgtcg
ctcgtttcagcagattttgtacaatcccaacttgagctaacacctgactttgaggtgatt
cgagtagaaatgaaacctgaaggttggtatcaaggagagcagctggtttatctcgataca
aacgctggaactttgaactctgaagtaaacgcaacgaaattggattttgttgtgccatgt
attcatggctttccgggagaaactggtgatatccaatcgatgctcgaacttacaggcatt
ccttatttaggttgtggtcctgaagcaagtacgaatagctttaacaaaattacgtcgaaa
ctctggtacgatgcactttccattccaaatacaccttatatctttttgtctgaaaacaat
aagcaggcatatgatcaaagcttagcggcgttcgagcagtgggatagtgtatttgttaaa
gcggctagacaaggttcttccgttggctgttacaaagtgactgagaaagatcagctgcaa
aaagcaatcaatgatgcgtttggatactcggatcaagtcttagtcgaaaaagcagtgaaa
cctcgcgagttagaagtggcggcgtatgaatacaaaggtcaattgcatgtgacttcaccg
ggagaaattaaagcgccggaagacacgttctattcatacgaagagaaatacagtgcagat
agtcattcgacaacagatgttgaagcgacgaatcttacagacgatcaacgactcattatc
caacaggcttctgaaaaagtgttcaaacaaatgaggctacgtcacttgtctcgaattgat
ttctttttaactccagaaggaaatgtgtacttgaatgaagtgaacaccttcccaggaatg
acaccaatttcgatgttcccgaaaatggttgaacatagtgggctaaagttctctgaattt
cttgctgattgcgtcaagagttcactttaa
DBGET
integrated database retrieval system
