KEGG   Vibrio cholerae O27 10432-62: VAB027_3500
Entry
VAB027_3500       CDS       T03829                                 
Name
(GenBank) exonuclease family protein
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
vcz  Vibrio cholerae O27 10432-62
Brite
KEGG Orthology (KO) [BR:vcz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vcz03019]
    VAB027_3500
   03009 Ribosome biogenesis [BR:vcz03009]
    VAB027_3500
Messenger RNA biogenesis [BR:vcz03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     VAB027_3500
Ribosome biogenesis [BR:vcz03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    VAB027_3500
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: AKB07540
UniProt: A0A085STT5
LinkDB
Position
complement(3791940..3792485)
AA seq 181 aa
MSFSDQNLIWIDLEMTGLDPETHKIIEMATIVTDSELNILAEGPVIAIHQPESELAKMDE
WCTTTHTASGLVARVRQSKVSEEEAIDQTLAFLKQWVPEGKSPICGNSIGQDRRFLYKHM
PRLEAYFHYRYIDVSTIKELTRRWQPEVLKEFSKTGSHLALDDIRESIAELQFYRKAVFK
I
NT seq 546 nt   +upstreamnt  +downstreamnt
atgtctttcagcgaccagaacctgatttggattgatttagagatgacgggacttgatcct
gaaacgcacaaaatcattgagatggcgaccattgttactgacagtgagttaaacatttta
gctgaaggcccagtgattgcgattcatcaacccgaatccgaactcgcgaaaatggatgaa
tggtgtaccacaacgcacaccgcaagtggcttggtggcgcgtgtgcgtcaaagcaaagta
agtgaagaagaagccatagatcaaacgctcgcgtttttaaagcagtgggtgccggaaggc
aaatccccgatttgtggtaacagtattggccaagatagacgcttcctttacaaacacatg
ccgcgtttggaagcgtacttccattatcgttatattgatgtcagcaccatcaaagagctg
actcgccgctggcagcctgaagtgctaaaagagttcagtaaaacaggtagccatcttgct
ttggatgatattcgagagtcaattgctgagcttcagttctatcgtaaggcggtattcaag
atctaa

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