Vibrio cholerae O27 10432-62: VAB027_3500
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Entry
VAB027_3500 CDS
T03829
Name
(GenBank) exonuclease family protein
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
vcz
Vibrio cholerae O27 10432-62
Brite
KEGG Orthology (KO) [BR:
vcz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcz03019
]
VAB027_3500
03009 Ribosome biogenesis [BR:
vcz03009
]
VAB027_3500
Messenger RNA biogenesis [BR:
vcz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
VAB027_3500
Ribosome biogenesis [BR:
vcz03009
]
Eukaryotic type
Pre-60S particles
RNases
VAB027_3500
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AKB07540
UniProt:
A0A085STT5
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All DBs
Position
complement(3791940..3792485)
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AA seq
181 aa
AA seq
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MSFSDQNLIWIDLEMTGLDPETHKIIEMATIVTDSELNILAEGPVIAIHQPESELAKMDE
WCTTTHTASGLVARVRQSKVSEEEAIDQTLAFLKQWVPEGKSPICGNSIGQDRRFLYKHM
PRLEAYFHYRYIDVSTIKELTRRWQPEVLKEFSKTGSHLALDDIRESIAELQFYRKAVFK
I
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcagcgaccagaacctgatttggattgatttagagatgacgggacttgatcct
gaaacgcacaaaatcattgagatggcgaccattgttactgacagtgagttaaacatttta
gctgaaggcccagtgattgcgattcatcaacccgaatccgaactcgcgaaaatggatgaa
tggtgtaccacaacgcacaccgcaagtggcttggtggcgcgtgtgcgtcaaagcaaagta
agtgaagaagaagccatagatcaaacgctcgcgtttttaaagcagtgggtgccggaaggc
aaatccccgatttgtggtaacagtattggccaagatagacgcttcctttacaaacacatg
ccgcgtttggaagcgtacttccattatcgttatattgatgtcagcaccatcaaagagctg
actcgccgctggcagcctgaagtgctaaaagagttcagtaaaacaggtagccatcttgct
ttggatgatattcgagagtcaattgctgagcttcagttctatcgtaaggcggtattcaag
atctaa
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