Vibrio cholerae O27 10432-62: VAB027_3547
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Entry
VAB027_3547 CDS
T03829
Name
(GenBank) exonuclease family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vcz
Vibrio cholerae O27 10432-62
Pathway
vcz03030
DNA replication
vcz03430
Mismatch repair
vcz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vcz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VAB027_3547
03430 Mismatch repair
VAB027_3547
03440 Homologous recombination
VAB027_3547
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vcz03032
]
VAB027_3547
03400 DNA repair and recombination proteins [BR:
vcz03400
]
VAB027_3547
Enzymes [BR:
vcz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VAB027_3547
DNA replication proteins [BR:
vcz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VAB027_3547
DNA repair and recombination proteins [BR:
vcz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VAB027_3547
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AKB06491
UniProt:
A0A085RPD5
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All DBs
Position
3847094..3847723
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AA seq
209 aa
AA seq
DB search
MNWLLRRYWHAKLKGSPYQRLFETARHHEYVSLDCETTSLDPKRAELVTIAATKIVDNRI
ITSQPFEVRLCAPQSLDSGSVRIHRIRHQDLHDGLSEKEALLQLIEFIGNRPLVGYHIRY
DKTILDIACRKHLGFPLPNRLIEVSQIYHDKLEKHLPNAYFDLSLEAICRHLDLPLQDKH
DALQDAIAAALVFVRLTKGDLPQFIAPGV
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgaactggttattacgccgttattggcacgcgaaactcaaaggttctccctatcaacgg
ctatttgaaaccgcgcgccatcacgagtacgtctcgctcgactgcgaaaccaccagctta
gatcctaaacgcgctgagttagtgaccatcgccgcaaccaagatcgttgataaccgcatt
atcaccagtcaaccctttgaggtgcgcctgtgcgcgccacaatcgctcgactcgggttca
gtgcggattcaccgtatccgccaccaagatctgcacgatggtttgagcgaaaaagaggca
cttctccaactgattgagtttattggcaatcgtcccttggtcggctaccacattcgttac
gataagacgattttggatatcgcctgtcgtaaacatctcgggtttccactccccaaccga
ctgattgaggtgagccagatctatcacgataaactggaaaaacatctgcccaatgcctat
ttcgatctcagtttagaggcgatctgccgccatctggatctgccgctgcaggataaacat
gatgcgctgcaagatgcgattgccgccgctttggtgtttgtgcgtttaaccaaaggcgat
ctgccacaatttattgcaccgggtgtgtaa
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