Vibrio diabolicus: AL552_24700
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Entry
AL552_24700 CDS
T05332
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
vdb
Vibrio diabolicus
Brite
KEGG Orthology (KO) [BR:
vdb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vdb03009
]
AL552_24700
Enzymes [BR:
vdb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
AL552_24700
Ribosome biogenesis [BR:
vdb03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
AL552_24700
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
Methyltransf_31
Methyltransf_25
FtsJ
Methyltransf_5
Cons_hypoth95
Methyltransf_11
Met_10
Methyltransf_15
MTS
Methyltr_RsmF_N
Methyltransf_24
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
AVF96624
LinkDB
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Position
1:complement(3160604..3161887)
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AA seq
427 aa
AA seq
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MNVRAAAANVLYLVVDKGHSLSSALPAAQQTVRPRDHALLQEICYGALRYLPRLEMIANQ
LMDKPLKGKQRVFHHLILVGIYQLSFMRIPAHAAVGETVEGTKELKGPRLRGLINAVLRN
YQRNQEELDQMAVSNNAGKYGHPSWLLKLLQEAYPQQWESIVEANNQKAPMWLRVNHQHH
TRDEYLELLKNENIDSTPHTEAMDAIKLAAPCDVMKLPGFDKGWVSVQDAAAQLSINYLK
PQDGELILDCCAAPGGKTAHILERTSGSEVVAIDCDDTRLKRVHENLKRLNLQAKVVCGD
ARNPQEWWQGEQFDRILLDAPCSATGVIRRHPDIKWLRRADDIAALAELQSEIFDAMWTQ
LKPGGTMVYATCSITPQENVEQVKAFLARTADAQLLDSDPDQPGRQILPGEEDMDGFYYA
VLTKTHA
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttcgcgctgcggctgctaacgtcctgtatcttgtcgtcgacaagggccactca
ctttcaagcgctcttccagcggctcaacaaacggtacgacctcgtgaccacgctctgcta
caagagatctgttacggtgcgctacgttacctacctcgcctagaaatgatcgcaaaccag
ttgatggataagccgctcaaaggcaaacaacgtgtattccatcacctaattctggttggc
atttaccaactgagcttcatgcgtattcctgcgcacgcagcagtcggtgaaacggttgaa
ggcactaaagagctgaaaggtcctcgtctgcgtggtttgattaacgctgtattgcgtaac
taccaacgcaaccaagaagaactcgaccaaatggccgtcagcaacaacgctggcaagtac
ggtcacccaagctggttactaaaactgctgcaagaggcctacccacagcaatgggaaagc
attgttgaagcgaacaaccaaaaagcaccaatgtggctgcgtgtgaaccatcaacaccac
actcgtgatgaataccttgagctgctcaaaaatgaaaacattgatagcacgccacacaca
gaagcaatggacgccataaaattggccgcaccatgtgacgtgatgaagctacctggtttt
gataaaggttgggtttcggtacaagatgcggcggcgcagctttcgatcaactacctaaaa
ccacaagacggcgaactgattttagattgctgtgctgcgccaggtggcaagactgcgcac
attctagagcgcacgtcgggtagtgaagtggtcgcgattgactgcgacgacacacgcttg
aaacgtgtgcatgaaaacctgaagcgtctcaaccttcaggcaaaagtggtttgcggtgat
gcgcgtaatccacaagaatggtggcaaggcgagcaatttgatcgcattttgctggatgcc
ccatgttctgcgactggcgtgattcgtcgtcacccagacatcaaatggctacgtcgtgca
gacgacatcgccgcattagcagagctacaaagtgaaatttttgatgccatgtggacgcaa
ctgaaacccggcggcacaatggtttacgcgacttgttcaatcacaccgcaagaaaacgtg
gagcaagtaaaagcgtttttagcacgtaccgcggatgcgcaactgctggattctgatccc
gaccagcctggtcgtcaaattctaccaggcgaagaagatatggatggtttctactacgca
gtgctaactaaaacacacgcgtaa
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