Vibrio sp. EJY3: VEJY3_00005
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Entry
VEJY3_00005 CDS
T01683
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
vej
Vibrio sp. EJY3
Brite
KEGG Orthology (KO) [BR:
vej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vej03016
]
VEJY3_00005
03036 Chromosome and associated proteins [BR:
vej03036
]
VEJY3_00005
Transfer RNA biogenesis [BR:
vej03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
VEJY3_00005
Prokaryotic type
VEJY3_00005
Chromosome and associated proteins [BR:
vej03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
VEJY3_00005
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
GIDA_C_1st
GIDA_C
FAD_oxidored
FAD_binding_2
Thi4
HI0933_like
Pyr_redox_2
Pyr_redox_3
DAO
AlaDh_PNT_C
NAD_binding_9
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
AEX20501
LinkDB
All DBs
Position
1:complement(join(3477248..3478307,1..836))
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AA seq
631 aa
AA seq
DB search
MLYHENFDVIVVGGGHAGTEAALASARTGQKTLLLTHNIDTLGQMSCNPAIGGIGKGHLV
KEVDAMGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRSALENAPNLTL
FQQSVDDLIVEQDHVVGVVTQMGLKFHAKSVVLTVGTFLGGKIHIGMESSSGGRAGDPPS
IALADRLRELPFRVDRLKTGTPPRIDARTVDFSVLEEQHGDNPTPVFSFLGNRDQHPRQI
PCFITHTNESTHDVIRANLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPE
GLTTNELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETK
FIHGLFFAGQINGTTGYEEAAAQGLMAGLNASLYSQGKEGWNPRRDQAYMGVLIDDLSTM
GTKEPYRMFTSRAEYRLLLREDNADLRLTEKARELGLVDDVRWARFNEKIENMETERQRL
KSTWMNPNSAGIDELNKLLKTPMAREASGEDLLRRPEISYSQLTQLDAFAPALDDQQAAE
QVEIQVKYDGYIKRQQDEIEKSLRHEHTKLPVDLDYKQVKGLSNEVVAKLSEAKPESIGI
ASRISGITPAAISILLVHLKKHGLLKKGEDE
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgctttatcacgaaaattttgacgtcattgttgttggtggcggacatgctggaacggaa
gccgcactcgcatctgcacgtacaggacaaaaaacgcttctccttacccataacatcgat
acattaggccaaatgtcttgtaatccagcgattggtggtattggtaaaggtcatttagtt
aaagaagtggatgcaatgggcggtttgatggcgcaagctattgaccatgcaggtattcaa
tttagaacgcttaatgcctctaaaggcccggcagtacgagcaactcgtgctcaagctgat
cgtgccctttacaaagcctacgttcgcagcgcattagaaaatgcaccaaacctaacgcta
ttccaacaatcggtagatgatctgattgttgaacaggatcatgtagttggcgtcgtgact
caaatgggtcttaaattccacgccaaatcggttgtattgacggttggaaccttcctgggt
ggtaagatccatatcggtatggaaagttcttctggtggccgtgcaggtgatccaccatcg
atcgcacttgctgatcgtctacgtgaactaccattccgcgtggatcgtctcaaaacaggg
acaccaccacgtattgatgctcgcaccgttgatttctctgtactcgaagagcaacacgga
gataacccaacaccagtattctcattcctgggtaatcgtgaccaacatccacgtcaaatt
ccgtgtttcatcactcacaccaacgaaagtacacacgatgtgatccgcgctaaccttgat
cgcagtccgatgtacgctggcgttatcgaaggcattggtcctcgttactgtccgtcgatt
gaagacaaagtgatgcgttttgctgacaaaaacagtcaccagatttttattgagccagaa
ggcctgacaaccaacgagctgtacccgaatggtatttcgaccagcttgccgtttgatgtt
caggtacaaattgttcgttcaatgaaaggttttgagaacgcacacattgtgcgtccgggt
tacgcgattgagtacgatttctttgatcctcgtgatttgaagcagacgtacgaaacgaaa
tttatccatggtttgttctttgcaggccaaattaacggtacaaccgggtacgaagaagcg
gccgctcagggcttgatggcgggtttgaacgccagtttgtacagccagggcaaagaaggc
tggaacccacgccgtgatcaggcttacatgggcgtattgattgatgacctatccaccatg
ggcaccaaagaaccgtaccgcatgtttacgtctcgcgcggaataccgcctgttgctacgt
gaagacaatgctgatttacgtttaaccgaaaaagcgcgtgagcttggtttggttgatgat
gtgcgttgggcacgattcaatgaaaaaatcgaaaacatggaaacggagcgtcaacgcctt
aagtcaacctggatgaatccaaactcagcgggcatcgatgagctcaacaaactgctaaaa
acaccaatggcgcgtgaagccagtggtgaggatctgctgcgtcgtccagagatctcatac
tctcagttgactcaattagacgcatttgcaccagctttggacgatcaacaggctgctgag
caagttgaaatccaggtgaaatacgatggctacatcaagcgtcagcaagatgagatcgag
aagtcactccgccacgaacacaccaagttaccggttgatctggattacaaacaagtaaaa
ggtctatcgaacgaggtagtggcaaaattaagtgaagcgaagccggaaagcatcggtatc
gcttctcgtatttcaggaattacaccagctgctatttctattctactggttcacctgaag
aagcatggcttactgaaaaaaggtgaggacgagtaa
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