Vibrio sp. EJY3: VEJY3_13295
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Entry
VEJY3_13295 CDS
T01683
Name
(GenBank) RNA polymerase sigma factor RpoE
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
vej
Vibrio sp. EJY3
Brite
KEGG Orthology (KO) [BR:
vej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vej03021
]
VEJY3_13295
Transcription machinery [BR:
vej03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
VEJY3_13295
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_16
HTH_20
Motif
Other DBs
NCBI-ProteinID:
AEX23135
LinkDB
All DBs
Position
1:complement(2969549..2970127)
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AA seq
192 aa
AA seq
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MNEQLTDQVLIERVQNGDKQAFNLLVTKYQNKVCNLISRYVSNPGDVPDVAQEAFIKAYR
AIPSFRGESAFYTWLYRIAVNTAKNHIVAQGRRPPATDVDAEDAEFYETGSALKEISNPE
NLTLSKELQRVVFSAIEALPEDLKTAMTLRELDGLSYEEIAEVMDCPVGTVRSRIFRARE
AVEKKIKPLLQR
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagcagctgaccgatcaagtattgattgagcgagttcagaatggcgataagcaa
gcattcaacctgctggtaacgaagtatcagaacaaggtatgtaatcttatctccagatac
gtaagtaatcctggcgatgttccagatgtagcacaagaagcgtttatcaaggcttaccga
gctatccccagttttcgaggggaaagtgcgttttatacgtggctgtatcgcattgcagtg
aatactgcgaaaaatcacattgtggcccaggggcgaagacccccagcgacagatgttgat
gctgaagatgctgaattttacgaaacaggtagtgcacttaaagaaatttcgaaccctgag
aacttaacgttgtccaaagaactgcaacgggtagtgttcagtgcaatcgaagccttacct
gaagatttaaaaacagcaatgacgttgcgagagcttgacggcttgagctatgaggaaatt
gctgaagtaatggattgcccggtaggaacggtacgctcacgtatcttccgtgctcgtgaa
gcggtggaaaagaaaatcaaacctcttttacaacgctag
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