KEGG   Vollenhovia emeryi: 105560576
Entry
105560576         CDS       T06016                                 
Name
(RefSeq) protein CLP1 homolog isoform X1
  KO
K14399  polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
Organism
vem  Vollenhovia emeryi
Pathway
vem03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:vem00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    105560576
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vem03019]
    105560576
Enzymes [BR:vem01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     105560576
Messenger RNA biogenesis [BR:vem03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Pre-mRNA cleavage factor IIm (CFIIm)
     105560576
SSDB
Motif
Pfam: CLP1_P CLP1_N Clp1 MMR_HSR1 ATP_bind_1 CbiA TniB AAA_14 AAA_22 AAA_24 nSTAND3
Other DBs
NCBI-GeneID: 105560576
NCBI-ProteinID: XP_011865193
LinkDB
Position
Unknown
AA seq 426 aa
MAGAESVVQRFKLDPDCELRFEVKSKNKVTLELISGLAEVFGTELVQGKKYEFTTEANIA
VYAPWHDCVVELVGLPGSSYMAKNTPMRIYLNCHEVLERMRQTAAYKDTVGPVTMVVGSH
NVGKSTLCKILLNHAVRKNRRPIFVDLDVSQGHISVPGTISALLMEHTSDVVKGFSQKVP
VVFHFGHKTPHANVMLYRLLVMQLATICKAKLQADYKKAKVSGIVINTFGCIKKDDYSLL
AHAVEEFKVDTILVLDEESLYYELVKDLSDLVKVIILPMSDGVVERSQDQRTEANNQSIK
KFFYGSQILLYSHSFVFNWSDIKLYKYGAPVPTCCAPLDKARDNPTKLVPVALGPHLLHR
LLSVSFTDNPETVLRTTISGFVCVTDVNVEKQTLTLLASQSTSLLNKALILSDIEFIASN
YEPHIK
NT seq 1281 nt   +upstreamnt  +downstreamnt
atggccggcgcggagtctgtggtgcaaagatttaagttggatccggactgcgaattgagg
ttcgaggtgaagagcaaaaataaggttacattggagttaataagtggtctggcggaagtt
tttggtacggaattggtacaggggaaaaaatatgagtttaccactgaagcaaatatcgcg
gtttacgcgccttggcacgattgtgtcgttgaattagttggactgccaggctccagctac
atggcgaagaatacgcctatgcgtatatacttgaattgccacgaggtgctagagcgaatg
agacagactgcggcgtataaagacactgtaggtccagtaacaatggttgtgggttctcac
aacgtcggcaagtctacactttgtaaaatactgctgaaccatgccgttagaaagaacaga
aggccgattttcgtcgatctagacgtcagtcagggacatatatcggttcctggcactata
agtgctttgttgatggaacatacgtccgatgtagtaaagggtttcagtcaaaaagttcca
gtggtcttccactttggacataaaacgccacacgctaacgtaatgttgtacagattactt
gtaatgcagttagcgacgatttgcaaagctaagttacaagccgactacaagaaggctaaa
gtgtctggaattgtcattaatacgtttggttgtatcaagaaggatgattactctttactc
gcgcatgccgtggaggagtttaaagtggacacgattctcgtgttggatgaagagagtctc
tactatgaattggtgaaagatctgtcggatttggtaaaggtgatcattctgccgatgagc
gacggagtcgtcgagaggagtcaagatcaaagaaccgaagcgaataatcagagcattaag
aaatttttctatggttctcagattctgttgtattcacatagcttcgtgtttaattggagc
gatataaaattatacaagtatggggcacccgtaccgacgtgttgtgcgccgttagacaaa
gcgagggataaccccacgaaattggtacctgttgcgctaggaccccatttgttgcatcgc
ttgctgtccgtttcctttaccgataatcctgagactgtcttacggactaccatatccgga
ttcgtctgtgtgactgatgtgaatgtcgagaagcagacgcttacactacttgcctcgcaa
tctacatcattactaaataaagcgctaatattgtcggatatagaatttatagctagcaat
tatgaaccacatataaagtaa

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