Vollenhovia emeryi: 105569079
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Entry
105569079 CDS
T06016
Name
(RefSeq) paired amphipathic helix protein Sin3b isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
vem
Vollenhovia emeryi
Pathway
vem04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
vem00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
105569079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vem03036
]
105569079
Chromosome and associated proteins [BR:
vem03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
105569079
REST complex
105569079
Heterochromatin formation proteins
Other heterochromatin formation proteins
105569079
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
Motif
Other DBs
NCBI-GeneID:
105569079
NCBI-ProteinID:
XP_011880630
LinkDB
All DBs
Position
Unknown
AA seq
1535 aa
AA seq
DB search
MRRHRVRNISNVIAMKRNVRALDDVTSSAAKHSVSAASGLGGGATSLDYHASGGIGVVVP
GQPVRSVTSKEMPGSIQFGTTQAQQQYTGAIVLPTAAQSPIKQTSGPAGGLGSTCSSSGI
STGTGLHSGIGGSGNSHAMASQQPTSGSQNQVHTQQQSTIRHKVHSGNVTPLASTPPGSN
LGGGSGSQQFQRLKVEDALSYLDQVKYKFSDQPQVYNDFLDIMKEFKSQSIDTPGVITRV
SHLFKGHPELIVGFNTFLPPGYKIEVQANEQGYAFQVSVSMPSPTATHTATLSQHHCTVN
VGSPPVASPPTQPAKAPPVLQIMQGSANIHHTLANSITTNSLTVHAPSPPPVSVYNNSHV
STAQAQAVSQALSQADGVSTGGQTQQSQPVEFNHAINYVNKIKNRFQGQPDKYKRFLEIL
HTYQKEQRNLKESGHIGGTSSGATGGTKHLTEAEVYSQVAKLFENQEDLLAEFGQFLPDA
TNQQSSLSAIFQTNKTTSVNDHTAIVKKPIGLKTPYNNSGGLPRELREVGGAAGLERDNR
DHRDRERERDRSNVRDIGSGQKCGHSTGQLKRSPSFSTSATAGNSHHIQHGPPPTKKHKV
ASMRDITIAEAGKYGTLNDYAFFDKVRKALRSQEVYENFLRCLVLFNQEIVSKSELVLLV
TPFLGRFPELLHWFKDFLGYLPDSSSATVTNAGNAVGVETFPNSIVRSHQERPQGDLAIE
IDYTACKRLGASYCALPKSYIQPKCSGRTQLCKEVLNDTWVSFPTWSEDSTFVTSRKTQY
EESIYRCEDERFELDVVIETNASTIRVLEGVHKKMSRMTQEEIQKYKLDECMGGCSPTIH
QRAIRRIYGDKAPDIIEGLKRNPAVAVPVVLRRLKAKEEEWREAQKGFNKIWREQNEKYY
LKSLDHQGINFKQNDVKALRSKSLFNEIETLYDERHEQGDDGNGDGQGNSGPHLVLPYKD
KSVLDDAANLLIHHVKRQTAVHKEDKQRIKLLLKHFMPDLFFHPRQELSDDERDEDDEKE
DVNVATCNNSQSATTTSSLSGLQANRNKAPTSPHTSSATCKNEPDVKVPMHALSSDPEEA
YTLFMGSNNWYLFLRLHHILCERLTKMYDRAVALADEESKYKQQRKESTAVALRLKPKSE
IEIEDYYPAFLDMVKNVLDGNMESTAYEDTLREMFGIHAYIAFTLDKVVNYAVRQLQHLV
SDTVCQQCMDLFQREQRQPKESSGAGGLCTTAYMRLSAELSYQRKAEKAMADENCFKIYI
YKKDCKMTMELLDTEGDETVDNGCREREREGVTVSEKWSTYVERFSAPADQTSPKDTPAL
TENEQTTNHPVSSDQAARGGRGRKRKNTDISKKIDGNTWASSGRASAGRKPIFLYRNIRS
YREHAARLMRGKTSSSLNANHSDKVAESSDTPDIINSDETQCRFNPNSYTMLFIVHQDRF
LYKQNSMNRAKQCHPTVTKRKDSKFHHWHAAWISENGTDIQHRLCQDWLMGRYENLIPHR
TRVLTDNNQQVSPYRQYNRFRVERLQSDILTEACI
NT seq
4608 nt
NT seq
+upstream
nt +downstream
nt
atgaggagacacagagtgagaaacatctccaatgtgattgcgatgaaacgcaacgttcga
gcactggacgacgtaacatcatcagcagcaaaacactctgtgagtgcggcgagtggctta
ggcggtggggcgactagcttagattaccacgcgagcggtggaataggtgtcgttgtacct
ggtcaaccagttcggtctgttacttcgaaagagatgcctggaagcatacagtttggtact
acccaggctcaacaacagtacaccggggcgattgttttgccgaccgcggcacaatctccc
atcaagcaaacgagcggtcctgcgggaggactcggctccacgtgtagcagtagcggcata
agcaccggcactggtttacatagcggaataggaggcagcggcaatagccacgcgatggcc
tcccagcagcctacgtcgggatcgcaaaatcaagtccacacgcagcagcagtcgacaata
aggcacaaggtacattctggcaatgtgacgccgttagcctctactccgcctggctctaat
ctaggaggaggaagtggatctcaacagtttcagcgattaaaagttgaagatgcattatcc
tacctggatcaagtaaaatataaatttagcgatcaaccacaggtttacaatgacttcttg
gacatcatgaaggaattcaaatctcagagtatagacaccccgggcgttataactcgagtg
agtcatctcttcaaaggtcatcccgaactcatcgtcggtttcaatacatttcttccgccc
ggctataaaatagaggtccaagcaaacgagcaaggttatgctttccaagtatcggtcagt
atgcccagtccaacggcgacgcacaccgccacgttgtcgcagcatcattgtacagtgaac
gttggctcgcctcctgtagctagcccacccacgcagcctgcaaaggcacctcccgtttta
caaataatgcaagggtcggctaacatacatcatactttggcaaacagtattacaactaac
agcttaactgttcacgcgccgtcaccgccgccagtatcagtgtataataattcacacgtg
agcactgcacaagcgcaggctgtcagtcaggcgttaagtcaggcggacggtgtgtcgact
ggtggacaaacgcagcaaagtcagccggttgaatttaaccatgcgataaactacgttaat
aaaattaagaatcggttccaaggtcagccggacaaatacaaacgtttcttggagatatta
catacgtatcagaaagagcagcgaaacctaaaggaatctggccatataggtggtacgagt
tccggcgcgacaggtggaacgaagcacttgacggaagcggaggtttacagccaggtcgct
aagttgtttgagaatcaggaggacttacttgctgagtttggacaatttttaccggacgcc
actaaccagcaaagttcgttgtctgccatatttcagactaataagacaacgtcggtcaac
gatcacacggcgattgtcaagaaaccaattgggcttaaaacaccttacaacaattctggt
ggcctgccgagagagcttcgagaagtcggcggcgcggctggactggaacgtgacaatcga
gatcatagagaccgcgagcgggaacgcgacaggtcgaacgtaagagatatcggtagcggc
cagaaatgcgggcacagcactggacaattgaaaaggagcccatcattctcgacttcggca
acagcgggaaattctcatcatatacaacatgggccgccgcctacgaagaagcacaaagtg
gcttcgatgcgggatattaccatcgcggaggcgggcaaatacggtaccctgaacgactac
gctttcttcgataaggttcgaaaagcgctcagatcgcaagaggtttacgagaacttcctt
cgatgccttgtacttttcaatcaagagatagtatcaaagtcggaactcgttctgttggtg
acaccgttccttggccgtttccccgagttgctacattggttcaaagattttctcggttac
ctgcccgactcgtccagcgctacggtgacaaacgcaggaaacgccgtaggcgtggagact
ttcccaaatagcattgtacgtagccaccaggagcggccgcaaggtgacttggcgatagaa
attgattatacagcatgcaagcggctgggggcgtcgtattgcgcgttgccgaaatcgtac
attcagccaaaatgcagtggcagaacgcaactgtgtaaggaggtccttaacgacacttgg
gtgtcatttccaacttggtcggaagacagcacatttgttacgtcgaggaaaacgcaatac
gaagaatccatatatcggtgcgaggacgaacgttttgaattggacgtcgttatagaaact
aatgcgtcgacgattagagtgctcgagggcgtccataagaaaatgagcaggatgactcaa
gaggagatacagaaatacaagctcgacgagtgtatgggtggttgttcccctacgattcat
caacgagcgataagaaggatatacggcgacaaagctcccgatatcatagagggtctcaaa
agaaatcccgcggtagccgtgcccgttgtgctccgccggctgaaggctaaggaggaggaa
tggcgggaagcgcaaaagggattcaacaagatctggagggaacaaaacgaaaagtactac
ttgaaatctctagatcatcagggaattaacttcaaacagaacgatgtgaaagcgttgagg
tccaagagtctgttcaatgagattgaaacgttgtacgatgagaggcacgaacagggtgac
gatggtaatggcgatggtcagggaaacagcggtccacatctcgttctaccctacaaggac
aagtctgtgttggacgatgctgctaacctcctgatccatcacgtcaaacggcaaactgct
gtccacaaagaagacaagcaacggataaaacttttattgaaacattttatgcctgatctc
ttcttccatccccgtcaagaactcagcgatgacgaaagggacgaagatgatgagaaggag
gacgtgaatgtggcaacgtgtaataattcgcaatccgcgacgactacttcgtcgttgagt
ggtttgcaagccaataggaacaaggccccgacgtcgccacacacatcttccgccacgtgc
aaaaatgagcctgacgtcaaagtacccatgcacgctctctcgagcgatcctgaggaagcc
tacacgcttttcatgggtagtaataattggtaccttttcctgaggttacaccatatactt
tgtgagagattaacgaaaatgtacgacagagcggttgctcttgccgatgaggagtccaag
tataagcagcagcgcaaggaaagtaccgcggtcgctctgagattaaaaccaaaaagtgag
attgaaatagaagattattatcccgccttcctggatatggttaaaaatgtcctcgatgga
aatatggaaagtacagcgtacgaagacacgttacgagaaatgtttggtatacatgcctac
attgcctttacactcgataaggttgttaattatgctgtcaggcagttgcagcacctagtc
tcggataccgtttgtcaacaatgcatggatttgttccaaagagagcaacgtcaacctaaa
gagagtagcggtgccggtgggttgtgcaccacggcctacatgagattaagcgccgaatta
tcgtatcaacgcaaagcggaaaaagcaatggcggatgaaaactgtttcaaaatatacata
tataagaaggactgcaaaatgacaatggagttgttagatacagagggagacgaaacggtg
gataacggctgtagagaaagagaaagggaaggcgttacagtctctgaaaaatggtcaacg
tacgttgagagattttctgcaccagctgatcaaactagccccaaagatactcctgcctta
acagagaatgagcagacgaccaatcatcctgtgagtagcgaccaggcagcaaggggggga
aggggcagaaaacgcaagaacactgacattagcaagaagattgacggaaatacttgggct
tcctcaggcagagcttcagcaggacgtaaacctatttttctctatcgtaatatcagatcg
tatcgagaacatgccgcgaggttaatgagagggaaaacatcatcttcgcttaacgctaat
cattcggataaagtcgcagagtcaagtgacactccagacataatcaattccgacgagaca
cagtgtagatttaatcccaacagttacaccatgctcttcattgtccaccaggacagattt
ctttacaaacaaaattccatgaatcgtgctaaacagtgtcatccgaccgtaacgaagcgt
aaggattccaaatttcatcactggcacgcagcgtggatatctgaaaacggcacggatatt
caacatcggttatgccaagattggttaatgggacgatacgagaacttgattcctcacagg
acacgagtgctaacggacaataatcaacaagtttctccctatcgtcaatacaatcgtttc
cgagtagaacgtctgcaatctgatatattgacagaggcgtgcatctaa
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integrated database retrieval system