Vibrio antiquarius: VEA_001275
Help
Entry
VEA_001275 CDS
T01107
Name
(GenBank) transcriptional regulator VpsT
KO
K20918
LuxR family transcriptional regulator, positive regulator of biofilm formation
Organism
vex
Vibrio antiquarius
Pathway
vex05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vex00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VEA_001275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vex03000
]
VEA_001275
Transcription factors [BR:
vex03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
VEA_001275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VpsT-like_REC
GerE
Sigma70_r4_2
HTH_30
Sigma70_r4
HTH_23
HTH_40
HTH_24
HTH_11
HTH_10
DUF2089
Motif
Other DBs
NCBI-ProteinID:
ACY53958
LinkDB
All DBs
Position
2:1449397..1450065
Genome browser
AA seq
222 aa
AA seq
DB search
MEQQKTRNVILITEGSLQSSLLKDVLETKLGISVALIIPDSLIQGALDSPLASAIIVDCS
VITDEIFRRYSEFKESQQKDTLEILINCDQSISTEDLFAWRTLAGIFYTSDDIKTLQVGI
DKVLKGDMWFSRKFSQQYITHLRRHCKPINKNVPAILTKREKQIITFLSMGASNQQIAEQ
LFVSENTVKTHLHNIFKKIEVKNRVQALIWAKENISDNSLTV
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atggagcaacaaaaaacaagaaatgtcattttaatcacggagggcagtctgcagtcatct
ctgctgaaagatgtattggagaccaaactcggtattagtgttgctctaatcataccagac
tctcttattcaaggagcgttagattcgcctttagcgtcagccattattgttgattgcagc
gtgatcactgatgaaatatttcggcgttattcggaatttaaagagtcgcaacagaaagat
acgctcgaaatcttaattaattgtgatcaatccatttcgactgaagatctttttgcttgg
cgtactctagcaggtattttttatacctctgatgatataaaaacgctgcaagttgggatt
gataaggtacttaagggggatatgtggttcagccgtaagttttctcagcaatacattact
caccttcgtcgccactgcaaaccgataaataagaacgttcccgctattttgaccaaacga
gagaaacaaataattacctttctctctatgggggcttccaatcaacaaattgccgaacaa
ctatttgtgagcgagaatacggtaaagactcatttacacaatattttcaagaagattgaa
gtaaaaaatagagtccaagcacttatttgggcgaaagaaaatatttcggataactcgtta
acagtgtaa
DBGET
integrated database retrieval system
