Vibrio antiquarius: VEA_001399
Help
Entry
VEA_001399 CDS
T01107
Name
(GenBank) formate dehydrogenase-O major subunit
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
vex
Vibrio antiquarius
Pathway
vex00630
Glyoxylate and dicarboxylate metabolism
vex00680
Methane metabolism
vex01100
Metabolic pathways
vex01120
Microbial metabolism in diverse environments
vex01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
vex00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
VEA_001399
09102 Energy metabolism
00680 Methane metabolism
VEA_001399
Enzymes [BR:
vex01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
VEA_001399
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Pyr_redox_2
Molydop_binding
Fer4_20
Molybdop_Fe4S4
Pyr_redox
Pyr_redox_3
NAD_binding_8
Fer4
Fer4_7
Fer4_10
Fer4_6
Fer4_9
DAO
Fer4_8
FAD_oxidored
FAD_binding_2
NAD_binding_7
Thi4
Fer4_2
Fer4_16
Fer4_18
HI0933_like
FAD_binding_3
Fer2_4
Fer4_21
Amino_oxidase
GIDA
Fer4_15
Fer4_22
Fer4_4
AlaDh_PNT_C
Fer4_3
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
ACY54082
LinkDB
All DBs
Position
2:1586890..1591053
Genome browser
AA seq
1387 aa
AA seq
DB search
MNKSNEKIPCDLCVVEVESGGTKRACDLKVYRGLNVVTQSEQLSEHRRKALNRIMTDHYA
DCEAPCKTACPAGVDIQSYLYHISQNDHQKAIEVIKRTLPMPLSIGRVCPAFCESECRRS
LVDEPIAIRQLKRHAADADLAAHEAYVPEKKPAKHRKIAVVGSGPGGLTAGYYLSNEGYD
VTVFESMPKAGGWLRYGIPEYRLPKDILDKEIELMCRNGMQVETNKKLSVDFTLSQLSED
YDAVCLAVGASQAVEMKYPGSELDGCYLGVDYLKDYVTEQNYVTGKKVAVIGGGNTAIDC
ARTARRAGADTTLIYRRTRDEMPAEDYEIVEAEHEGVKFHFLTNPAENIADENGRVKAIR
LERMALGEPDASGRRSPKPTGEFFTEAFDTVIAAVSQKPDLSFLENDELSIPLTRWNTSE
SDSQTMHTGTGNIFSIGDFRRGPATAVEAVGDGRVAAKAIDLFLNGDMADMPKPAFNSRK
EKKLAQVDPLHFENIQKVARSIMPELTPAQREQSFAEVELGFDNEEAMKEAARCLECGCQ
ANTDCALRDYSTEYHAEQHFDVSVDVSSASVIGHQDWLDLRAKDLRHKYEVDRSSEFIEF
DANRCISCGQCIQACREQAVHGVLSFVSDKNGRPALRPDDRPRFRSDEKGASCSGLTLMG
NSNCVQCGACVQACPTGAMVDSRDRSQGRTEQLKAVDTICTYCGVGCKLTMFVDERQNKI
RYVKGADSPVNQGMLCVKGRFGFDFISSEERLTTPLIRKDGWLQPASWDEAIQLVASKLS
TIKQDFGNNALAGFSSAKTTNEDNYAFQKFIRRELGTNNVDHCARLCHASSVTGLEASLG
SGAMTNDIPSIKHSDVIFIIGSDTTSAHPIIASHIKQAIRHHGARLIVADPKRVDMAEHA
DLYLAHRPGTDVMLLNGVMQQIIKNGWYDQEYIEERVDGFDTLLQEVMSPAYNLDKVELV
TGIKADDIFAMARMIGTAKRTAVYYSMGITQHTTGHDNVRSIANLQLLCGNIGIEGGGIN
PLRGQSNVQGACDMGALPNCYPGYQKVYNPIVRQKFAIEWDAPNLPSEQGLTLTEIIDAA
CKREVRGMYIMGENPVLSDPNQAHVIEGLEALDFLVVQDIFLTETAQYADVVLPSCSFAE
KSGHFTNTERRVQRVNAAVKAPGEAKEDWWIIQAIANAMGSDWHYQCVSEITSEIARVTP
QYAGLRWDAITPNGVQWPSNKNNPNGTRIMHQTQFTRGKGQMVGVPFRYAAELPDEEYPL
VLTTGRVLEQFHTGTMTRKTKGLDNLAGPRAMISVEDAEAIGIHNGQRLKVSTRRGSIEI
DAFVTKRMQKGVVFIPFHFVESPVNRLTTTATDPHAKIPEFKVAAVKIEISETAAQPEPV
EEAVHHL
NT seq
4164 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaagtaacgagaaaattccgtgtgatttgtgtgtggtcgaagtggaaagtggc
ggaactaagcgcgcctgtgatctcaaagtgtaccgcggtctcaatgtcgtcacacaatca
gaacaactgagtgagcaccgcagaaaagcgctcaaccgaatcatgacggaccactacgcc
gactgtgaagctccatgcaaaacggcgtgtcctgctggggtagacatccaatcttatctc
taccatatctcgcaaaacgatcatcaaaaagcgattgaagttattaaacgcacactacca
atgccgttgtcgattgggcgtgtgtgtccggcattctgcgaaagtgagtgtcgccgttct
ttggtggatgagccgattgccattcgccaactcaaacgccatgccgcagacgcagattta
gcggcgcatgaagcgtatgtcccagagaaaaaaccagcgaagcatcgcaagatcgccgtt
gttggtagtggccccggtggcttaacggcaggttattacttgtcgaatgaaggttatgac
gtcaccgtatttgagtccatgcccaaagcaggcggttggctacgctacggcattcctgaa
tatcgcctacccaaagacattctagacaaagaaatcgaactgatgtgccgcaacggtatg
caagttgaaaccaacaaaaagcttagtgttgatttcacgctgtcgcaattgagtgaagac
tacgatgctgtctgtttggcagtgggggcgtctcaagcggtagaaatgaagtatcctggt
agcgagttggacggttgctacctcggtgttgattacctgaaagattacgttacagagcaa
aactacgttacgggcaaaaaagttgccgtgattggtggtggtaacactgcgatcgactgt
gcgcgtacggcgcgtcgtgcgggtgccgataccactttgatctatcgtcgaactcgcgac
gaaatgccggccgaagactacgaaatcgtcgaagctgaacatgagggcgtgaagttccat
ttcttgacgaatccggcggaaaacatcgcggatgaaaacggccgcgtgaaggcaattcga
ttagagcgaatggcgttaggtgagccagatgcgtctggtcgtcgtagcccgaaaccaacg
ggtgagttctttactgaagcatttgataccgtgattgcagctgtatcgcaaaagccggat
ctcagcttcttagaaaacgatgagctgtccattcctctaacgcgttggaacacatctgag
tccgactcgcaaaccatgcacacgggtacgggcaatatcttcagtatcggtgattttcgt
cgtggtcctgcgactgcggttgaagcggtgggggatgggcgagttgcggcaaaagcgatt
gatctgttcctcaatggcgatatggcggatatgccgaaacctgcgttcaactctcgtaaa
gagaaaaaactggcgcaggttgacccacttcattttgaaaacatccaaaaagttgctcgt
tcaatcatgccggagttgactccagcgcagcgtgagcagagttttgctgaagtggaactg
ggctttgataacgaagaggccatgaaagaagcggcgcgctgcttagagtgtggttgccaa
gcgaataccgactgtgccttgcgagattactcaacggaatatcatgccgagcaacatttc
gatgtttccgtggacgtttcctctgctagcgtgattggtcatcaagattggctcgatttg
cgagcgaaagatcttcgtcataaatacgaagtagaccgcagttctgagttcattgaattt
gatgctaaccgctgcatcagttgtggtcagtgtattcaagcatgccgcgagcaagcggta
catggtgtgttgagttttgtgtcggataaaaatggccgaccagctttacgaccagatgat
cgtccacgattccgctccgatgaaaaaggcgcaagttgcagtggtttgacgctcatgggc
aattcaaattgcgtgcaatgtggggcgtgtgttcaggcatgtccaacgggcgcgatggtg
gacagccgtgaccgctctcaaggcagaaccgaacagctaaaagccgtcgataccatttgt
acctattgtggtgtgggttgtaagttgaccatgtttgtcgatgagcgacaaaacaaaatc
cgctatgtaaaaggtgcggattcgccagttaaccaaggaatgctgtgcgtgaaaggccgt
tttggttttgatttcattagcagcgaagagcgtttaacgacaccactgattcgtaaagat
ggttggttgcagccagcaagttgggacgaagcgattcagctagtggcttcgaagctttcg
accatcaagcaagattttggtaacaacgcactggccggattctcttcagcgaaaaccact
aacgaagataactacgcgtttcaaaaattcatccgtcgtgaacttggtacgaacaacgtt
gatcactgcgcacgtttgtgtcacgcatcaagtgtgacagggcttgaagcatcgttgggg
agtggtgcgatgaccaacgacattccgagcattaagcattccgatgtgatctttattatc
ggttctgacaccacatctgcgcacccgatcatcgcttcgcacatcaaacaggcgattcgt
catcacggggcacgcttgattgtggcagacccgaaacgagtggacatggccgaacatgca
gatctgtacttagcgcatcgaccgggtacggatgttatgttgctcaacggcgtgatgcag
caaatcatcaaaaatggttggtacgatcaagaatacatcgaagagcgcgtcgacggcttt
gataccttgcttcaagaggtgatgtcaccagcgtacaacctcgacaaagttgagttagtg
acgggcataaaagcggacgatattttcgcgatggcgcgaatgattggtacggcaaaacgc
accgcggtgtattactcaatgggtattacccagcatacgacagggcacgacaacgttcgt
tcgattgcaaacctgcaattgttgtgtggcaacatcggtattgagggtggtggtattaac
ccactgcgcggtcaatcaaacgtacaaggtgcgtgtgatatgggcgcattgccgaactgt
tatccgggataccaaaaagtgtataacccgattgttcgtcagaaattcgcgattgagtgg
gatgccccgaacttaccttctgagcaagggcttaccctaacggaaatcatcgatgcggcg
tgcaaacgagaagttcgcgggatgtacatcatgggcgaaaacccagtactgagtgatcca
aaccaagcacacgtgattgaagggttggaagcactcgacttcttggtcgtgcaagacatc
ttcctcaccgagacggcgcagtacgccgatgtggtattgccttcttgttcatttgcggaa
aaatccggtcacttcaccaatactgagcgacgcgtgcagcgcgttaatgcggcagtgaaa
gcgccgggtgaggcgaaagaagattggtggatcattcaagcgatcgcaaacgcgatgggc
agcgattggcattaccagtgtgtttctgaaatcactagcgagatcgcgcgtgtaacgccg
caatatgcagggttgcgttgggacgcgatcacgccgaacggtgttcaatggccaagtaac
aagaacaatccaaatggtactcgtatcatgcaccaaacccaatttacccgagggaaaggg
caaatggtgggcgtgccgttccgctatgcagctgagttgcctgatgaagagtatcctttg
gtgcttacaacagggcgtgtgctagaacagttccacaccggtacgatgacacgcaaaacg
aaagggttggataaccttgctgggccaagagcgatgatcagtgttgaagatgccgaagca
attggtatccacaatggtcagcgcctaaaagtgtcgactcgtcgtggcagcatcgaaatt
gatgcgtttgtgaccaagcgaatgcaaaaaggggtggtgtttatcccattccatttcgtt
gagtcgccagtcaaccgcttgacgaccacggcaacggacccgcatgcgaaaattcctgaa
ttcaaagtcgcggcggtgaagattgaaatcagtgaaacggccgctcaaccagagcctgtc
gaggaggcggtacaccacctctaa
DBGET
integrated database retrieval system