Vibrio antiquarius: VEA_001917
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Entry
VEA_001917 CDS
T01107
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
vex
Vibrio antiquarius
Pathway
vex03030
DNA replication
vex03410
Base excision repair
vex03420
Nucleotide excision repair
vex03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VEA_001917
03410 Base excision repair
VEA_001917
03420 Nucleotide excision repair
VEA_001917
03440 Homologous recombination
VEA_001917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vex03032
]
VEA_001917
03400 DNA repair and recombination proteins [BR:
vex03400
]
VEA_001917
Enzymes [BR:
vex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VEA_001917
DNA replication proteins [BR:
vex03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
VEA_001917
DNA repair and recombination proteins [BR:
vex03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
VEA_001917
NER (nucleotide excision repair)
GGR (global genome repair) factors
VEA_001917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ACY50080
LinkDB
All DBs
Position
1:complement(310656..313442)
Genome browser
AA seq
928 aa
AA seq
DB search
MASIPENPLILIDGSSYLYRAFHAYPGTMSNGEIPTNAVYGVVNMLRSMMRQFASERIAV
VFDAKGKTFRDDMYAEYKANRPPMPDDLRCQIEPLHNVIRAMGLPLICVPGVEADDVIGT
LAHQASQKGMPVLISTGDKDMAQLVDDNITLINTMTNVVMDREGVVEKFGIPPELIIDYL
ALMGDKVDNIPGVPGVGDKTATALLQGIGGLTKLYENLDDIAALGFRGSKTMAKKLIDNK
ENAMLSYELATIKLDVELEETPESLLKAEPNKDELVKLYGQLTFKSWLNELLEGGSGSVE
AVELAGSAQASASHAEMETSAVTIDRSQYETILDEETFNAWLDKLQTAELFAFDTETDNL
DYMLANLVGLSFAVDEGIAAYVPVAHDYLDAPEQLDRDWVLEQLKPILEDAAKAKVGQNL
KYDASVLARYDIELKGIKHDTMLESYIYNSVGGKHDMDSLALRFLQHSCISFEQIAGKGK
NQLTFNQIELEQASPYAAEDADVTLRLHNRLFANIEQDESLKTVYEEIEMPLVPVLSRIE
RTGVFIDEMKLSAQSVEITARLDELEKKAYEIAEQEFNMNSPKQLQAILFEKMGLPVVKK
TPSGTPSTNEEVLQELALDYPLPKLILEYRGLAKLKSTYTDKLPKMINPTTGRVHTSYHQ
AVTATGRLSSTDPNLQNIPIRNEAGRRIRQAFVAPSGHKILAVDYSQIELRIMAHLSGDQ
ALLDAFRDGKDIHAATAAEIMGLDIEQVSSEQRRRAKAVNFGLIYGMSAFGLAKQLGIPR
GEAQAYMDKYFERYPGVMQYMEDTRSTAADKGYVETIFGRRLHLPEIKSRNGMRRKAAER
AAINAPMQGTAADIIKKAMLLVDQWIQEEGNGRVKLLMQVHDELVFEVEESSLSEIESKV
QKLMESAAELKVPLVAEAGHGDNWDQAH
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtattcctgaaaatccgttgatccttatcgacggctcttcttacctatatcgc
gcttttcacgcctacccgggcaccatgagtaatggtgaaattccaacgaatgccgtttac
ggtgtcgtgaacatgttacgtagcatgatgcgtcagtttgcgtctgagcgcatcgcggtg
gttttcgatgcgaagggaaaaaccttccgtgatgatatgtatgcagaatacaaagctaat
cgtccgccaatgccggatgatctgcgttgccaaattgaaccgttgcacaatgttattcgc
gcgatgggtttaccactgatctgcgttcctggtgtcgaagcagatgacgtcattggtacg
ttggcgcatcaagcatcacaaaaaggcatgcctgtattgatcagtactggtgataaagac
atggcgcagttggtggatgataatattaccttgatcaacaccatgacgaacgtcgtgatg
gatcgtgaaggtgtggttgaaaagtttggcattccacctgagttaatcatcgactaccta
gcgctgatgggcgataaagtagataacatccctggtgtaccaggcgtgggtgataaaaca
gcgaccgcactactgcaaggtattggcggtctgactaagctgtatgaaaatctcgatgac
attgctgcgctcggtttccgtggttctaaaaccatggcgaagaagctcatcgataacaaa
gaaaatgccatgctgtcgtacgagctcgcaaccattaaattggatgttgaacttgaagaa
acgccagaatcactgctgaaagcggaaccaaataaagacgaactggtgaagctgtatggt
caactgacgtttaaatcttggttgaacgaattacttgaaggtggttctgggtcggtagaa
gctgttgagcttgctggctctgctcaagcctctgcttctcatgccgagatggaaacttcc
gcagtgacaatcgaccgcagccaatatgaaacgattctggatgaagaaaccttcaatgcg
tggctagacaaacttcaaacggccgagttgtttgcgtttgatacggaaaccgacaaccta
gattacatgctagcgaatctggttggtttgtcattcgctgtcgatgaaggtattgctgct
tatgtgcctgttgcacatgactacctagatgcacctgaacagcttgatcgtgattgggtt
ctagaacagctgaagccaattcttgaagatgcagcgaaagcaaaagttggtcaaaactta
aagtatgatgcgtctgtattggctcgttatgacattgagctaaaaggtatcaagcacgac
acgatgttggaatcgtacatttacaacagtgtcggcggtaaacacgatatggacagcttg
gcgctgcgcttcctacagcatagttgcatttcttttgagcaaattgcaggtaaaggcaaa
aatcagcttacgtttaaccaaatcgagttggaacaagcatcgccatacgcggcagaagat
gcggatgtgacccttcgtctgcacaatcgcttgtttgcgaatatcgagcaggatgaaagc
ctaaagacagtttacgaagagattgaaatgccgttggtgccagttctttcgcgcattgaa
cgcactggggtctttatcgatgaaatgaagctgagtgcgcagtcggtcgagattaccgct
cgccttgatgagcttgaaaagaaagcgtatgaaattgcagagcaagagttcaacatgaac
tcgccaaagcaattacaagccatcctatttgaaaaaatgggtttaccggtggtgaagaaa
acgccatcaggtacaccatcgacgaatgaagaagtgctgcaagagcttgccttagattac
ccactgccaaaattgattttggaataccgtggtttggcgaagcttaaatcgacgtacacg
gacaagctgccgaagatgatcaacccaacaacagggcgtgtgcatacttcttaccatcaa
gcagtaaccgcaacaggtcgtctatcttctaccgatccgaacttacaaaacattccaatt
cgtaacgaagccggccgtcgtattcgccaagcgtttgtcgcaccatctgggcataagatc
ttagcggtcgactactcgcaaatcgaactgcgcatcatggctcacctttctggcgaccaa
gcgttattagatgccttccgtgatggtaaagacattcacgctgcaactgcggcagaaatt
atgggtctggatattgaacaagtatccagtgagcagcgtcgccgtgctaaagccgttaac
ttcgggcttatctatggcatgagtgcatttggtttggcgaagcagcttggtatccctcgc
ggcgaagcacaagcctacatggataaatactttgagcgttaccctggcgttatgcagtac
atggaagacacgcgcagcacggctgcagataagggctatgttgaaacgatttttggtcga
cgtttgcatttaccagaaatcaaatcgcgcaacggtatgcgtcgtaaagctgctgaacgt
gcggcaatcaacgcaccgatgcaaggtacagctgcggacatcattaagaaagcgatgctg
ttggttgatcagtggattcaggaagaaggcaatggccgtgtgaagttgttaatgcaagta
cacgatgaattggtctttgaagttgaagagtcatcattgtccgaaattgaaagtaaagta
cagaaattgatggaatctgcagcagagctaaaagtaccgttggttgcagaagcagggcac
ggtgacaactgggatcaagctcattag
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