Vibrio antiquarius: VEA_003002
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Entry
VEA_003002 CDS
T01107
Name
(GenBank) DNA polymerase III delta prime subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
vex
Vibrio antiquarius
Pathway
vex03030
DNA replication
vex03430
Mismatch repair
vex03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VEA_003002
03430 Mismatch repair
VEA_003002
03440 Homologous recombination
VEA_003002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vex03032
]
VEA_003002
03400 DNA repair and recombination proteins [BR:
vex03400
]
VEA_003002
Enzymes [BR:
vex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VEA_003002
DNA replication proteins [BR:
vex03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VEA_003002
DNA repair and recombination proteins [BR:
vex03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VEA_003002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
DUF3053
AAA
Motif
Other DBs
NCBI-ProteinID:
ACY51164
LinkDB
All DBs
Position
1:1549531..1550493
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AA seq
320 aa
AA seq
DB search
MLNDYPWLQPVWDNLKVGLESDRIPGALLLQSEQGLGIEKLIEFFSQALLCQNYASEACG
FCHSCQLNQSHNHPDLHWIKPEKEGKAITVDQVRACNRLAQESSQLNGYRLFVIEPADSM
NESASNALLKTLEEPGAKCLFLLVTHNQERLLPTIRSRCQHWVVAPPSTEQAMQWMREQG
AQQVPAYALKLNMGSPIKTLDALNNGDLDAYLAFERTFIKAMSSPASDISECASLMAKHS
EQSLDWAWYLLTDAQKVQFGVSEAQMLPGAIKFQPNNYNGLYSSAKALMDLKAQVQAFPG
LNLELLSMNWLIESREVLCS
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgttaaatgattatccatggttgcagccagtatgggataacctcaaagtagggctagag
tcggacagaataccaggtgcgcttttattgcaaagcgagcaaggcttaggcatcgaaaaa
cttatcgagttttttagccaagcacttctttgccaaaattacgccagtgaagcgtgcggt
ttttgtcatagctgtcaattaaatcaatcacacaaccacccagatttacactggatcaaa
ccagaaaaagaaggaaaagcgataacggtggaccaagttcgagcttgcaaccgtcttgct
caggaatcatcacagcttaatggttatcgcctatttgttatagagccagcggactctatg
aatgaatcggcatcgaatgcattgttaaaaacgctagaagagcctggggcaaagtgcttg
tttttgctcgttacccacaatcaggagcgcctgcttccaacgattcgtagccgttgccaa
cactgggttgttgcgccgccgtcaacggagcaagcgatgcaatggatgcgtgaacaaggg
gcgcagcaagttcctgcttacgccttaaaactgaatatgggctctccgataaaaacattg
gatgcgttaaataatggcgatctcgatgcttacttggcttttgagcgcacttttattaag
gcgatgtcttctcctgcctcagacatttctgagtgtgcttctttaatggctaaacactcg
gagcaatcactagactgggcgtggtatttactgacagacgctcagaaagtgcagtttggt
gtatcagaagcacaaatgcttcctggcgctataaagtttcagccgaacaactacaacggt
ttgtactcatcagcgaaggcgctgatggacctcaaagctcaggttcaagcctttcctggt
ctaaaccttgagctactatcaatgaactggttaattgaatcacgagaggtattatgttcg
tag
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