Vitreoscilla filiformis: VITFI_CDS0499
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Entry
VITFI_CDS0499 CDS
T04960
Name
(GenBank) RND efflux system, inner membrane transporter CmeB
KO
K18138
multidrug efflux pump
Organism
vff
Vitreoscilla filiformis
Pathway
vff01501
beta-Lactam resistance
vff01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vff00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VITFI_CDS0499
01503 Cationic antimicrobial peptide (CAMP) resistance
VITFI_CDS0499
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vff02000
]
VITFI_CDS0499
01504 Antimicrobial resistance genes [BR:
vff01504
]
VITFI_CDS0499
Transporters [BR:
vff02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
VITFI_CDS0499
Antimicrobial resistance genes [BR:
vff01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
VITFI_CDS0499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
ASM76278
UniProt:
A0A221KB83
LinkDB
All DBs
Position
complement(536285..539419)
Genome browser
AA seq
1044 aa
AA seq
DB search
MFILVIGAAAITRLPVAQYPTVAPPSIVITATYPGASAQVLEDSVLAVIEQELNGAPGLI
YMESAAEATGAGTLTVTFEPGTDVAIAQIEVQNRLSRATPRLPSAVTQQGVRVDKARSNF
LMFVMLTSTNPAYDPVALGDYAARNIQPELLRVPGVGQAQLFGTEKAMRVWIDPHKLAGL
NLSPADVSSAIRAQNLQISAGSIGGLPNLKEQTQFASINVNGQLTTIEQFGNILVRANTD
GSSVRLKDVARIELAGQAYNSSARLNGVSATGIGIQLSPTGNALATADGVRQRMAQLKQF
MPEGVSFDVPYDSSKFVRISIHEVIKTLVEAIALVFVVMLLFLQNIRYTLIPTIVVPVAL
TGTFAVMLMLGFSINVLTLFGMVLAIGILVDDAIVVVENVERIMAEEGLSPREATVKAMG
QITGAIIGITVVLISVFVPMAFFSGSVGNIYRQFSLAMVASMVFSAAMALSLTPALCATL
LQPISADHHEKTGFFGWFNRSFKRTAKGYESVVARILPRAGRFLVIYAAILAAVGLMYQK
LPTSFLPNEDQGYLIVNVQLPPGAAQGRTEAVMGQVEKFFLAQPEVDKVVGVLGFSFSGS
GQNAALAFVPLKPWEERQGPQHTAQALAGRAFGALMGIRDAFIFPLSPPPIPELGNATGF
SFRLQDRTGQGHDALLAARNQLLGMASQSKLLTGVRPDGLEDAPQLQLDIDRERAAAMGV
SFDAIGAVLSTALGSSYINDFPNAGRLQRVIVQAEAKARMQPEDVLKLYVPNTKGQQVPF
SAFASTRWVKGPIQTIRYNGYPAMKISGDAAPGHSTGEAMAEMERLAGQLPSGFGFEWTG
QSREEKLSGSQAMVLLAFSMLAVFLCLAALYESWSIPVAVLLVVPLGIVGSLGGVWLRDM
PNDVYFKVGLITIIGLSAKNAILIIEFAKDLQAEGKGLIEATLEACHLRFRPIIMTSFAF
ILGVVPLAIASGAGSASQRAIGTGVMGGMITATVLAVLLVPVFFVVIRRLFPSSGHEAPH
GTTIGSAASDAALAAALHHKEDRA
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
ttgttcatcctggtgatcggcgcggcagccatcacccggctgccggtggcgcagtatccg
acggtggcgccgccgtccattgtcatcacggccacgtatccgggcgcctcggcgcaggtg
ttggaggattcggtgctggccgtcattgagcaagagctcaacggcgcgccggggctgatt
tacatggaatcagccgccgaagccaccggcgccggcacgctgacggtgacgttcgagcca
ggcaccgatgtggccatcgcccaaattgaggtgcaaaaccgcctgagccgcgccacgccg
cgcctgcccagcgcggtgacacagcaaggcgtgcgcgtggacaaggcgcgttcgaacttc
ctgatgttcgtgatgctgacctcgaccaatccggcctatgacccggtggccttgggcgat
tacgccgcacgcaacatccagcccgaattgctgcgcgtgccgggtgtcggtcaggcgcaa
ctgttcggcacggaaaaagccatgcgggtgtggatcgacccgcacaagctggcgggcctg
aacctcagcccagcggacgtgagcagcgccatccgcgcccaaaacctgcaaatctcggcg
ggcagcattggcgggttgcccaatctgaaggagcagacgcagttcgcgtcgatcaacgtc
aacggccaactgacgacgattgagcagttcggcaacatcctggtgcgcgccaacaccgat
ggctccagcgtgcgcttgaaggacgtggcccgcatcgagctggccgggcaggcttacaac
tcctcggcgcggctcaatggggtgagtgccaccgggattgggattcagttgtcgcccacc
ggcaacgccctggccaccgccgacggcgtgcgccagcgcatggcccagctcaagcagttc
atgcccgaaggcgtgagcttcgacgtgccttacgacagctccaagttcgtgcgcatctcc
atccacgaagtcattaagacgctggtggaagccatcgccttggtgtttgtggtgatgctg
ctgttcttgcagaacatccgctacacgctgattccgaccatcgttgtgcccgtggcgctg
accggcacttttgccgtgatgctgatgctgggtttttccatcaacgtgttgacgctgttc
ggcatggtgctggccatcggcatcttggtggacgacgccatcgtggtggtggaaaacgtc
gagcgcatcatggccgaagagggtttgagcccgcgtgaggccacggtcaaggcgatgggc
cagatcaccggcgccatcatcggcatcaccgtggtgctgatttcggtgttcgtgccgatg
gcgtttttcagcggctcggtgggcaacatctaccgccagttctcgctggcgatggtggct
tcgatggtgttttcggcggccatggcgctgtcgctcacgccggcgctgtgtgccacgctg
ctgcaacccatctcagcggatcatcacgagaaaaccggcttcttcggctggttcaaccgc
agtttcaagcgcaccgccaaggggtatgaatcggtggtggcgcgcatcctgccgcgtgcg
gggcggttcttggtgatttatgccgccatcctggccgccgttgggctgatgtaccagaag
ctgccgacctcgttcctgccgaacgaagaccagggttatttgatcgtcaacgtgcaattg
ccgccgggggctgcgcaggggcgcaccgaagcggtgatggggcaggtcgagaagttcttc
ctggcccagccggaggtggacaaggtcgtgggcgtgctgggtttcagcttctcgggttcg
gggcaaaacgccgcgctggccttcgtgccgctcaagccgtgggaggagcgccaaggccca
caacacaccgcgcaagccctggccgggcgggcgtttggggcgctgatgggcatccgggat
gcgttcatcttcccgctgtccccgccgccgattccggagctgggcaacgccacggggttc
agcttccgcttgcaagatcgcaccggccaaggccacgacgccttgttggcagcgcgcaac
cagttgctgggcatggcttcgcaaagcaagctgttgaccggcgtgcgcccggacggcctg
gaagacgcgccgcagttgcagctcgacatcgaccgcgaacgcgccgctgccatgggggtg
agttttgatgcgatcggcgcggtgctctccaccgccttgggctccagctacatcaatgac
ttcccgaacgccgggcggctccagcgcgtgatcgtgcaggctgaagccaaggcccgcatg
cagccggaggatgtgctcaaactctacgtgcccaacaccaagggccagcaggtgccgttt
tcggcatttgccagcacgcgctgggtgaaggggccgatccagaccatccgttacaacggc
tacccggccatgaaaatcagcggtgacgcggcccccggccactccaccggcgaggccatg
gccgagatggaacgcttggccggtcagttgccttcgggctttgggtttgagtggacgggc
caatctcgcgaggaaaaactctcgggctcgcaagccatggtgctgctggcgttttccatg
ctggcggtgttcctgtgcttggcggcgctgtacgagagctggagcatcccggtggcggtg
ctgctggtggtgccgttgggcatcgtcggttcgctgggcggggtgtggctgcgggacatg
cccaatgacgtgtatttcaaagtcgggctgatcaccatcattggcttgtcggcgaagaac
gcgatcttgatcatcgagttcgccaaggatctgcaagccgaaggcaagggtctgatcgag
gccacgctcgaagcctgccacctgcgcttccgtccgatcatcatgacctcgtttgccttc
atcctgggcgtggtgccgttggccattgcgtccggggcgggttcggcgagccagcgggcc
atcggcaccggggtgatgggcgggatgatcacggccacggtgctggcggtgctgctggtg
ccggtgtttttcgtggtgattcgccgtttgttcccgtccagcggccacgaggcgccgcat
ggcaccaccatcggttcggctgccagcgacgccgccttggccgccgcgttgcatcacaag
gaggatcgcgcatga
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