KEGG   Vitreoscilla filiformis: VITFI_CDS2396
Entry
VITFI_CDS2396     CDS       T04960                                 
Name
(GenBank) DNA-directed DNA polymerase
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
vff  Vitreoscilla filiformis
Pathway
vff03030  DNA replication
vff03430  Mismatch repair
vff03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vff00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    VITFI_CDS2396
   03430 Mismatch repair
    VITFI_CDS2396
   03440 Homologous recombination
    VITFI_CDS2396
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vff03032]
    VITFI_CDS2396
   03400 DNA repair and recombination proteins [BR:vff03400]
    VITFI_CDS2396
Enzymes [BR:vff01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     VITFI_CDS2396
DNA replication proteins [BR:vff03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     VITFI_CDS2396
DNA repair and recombination proteins [BR:vff03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     VITFI_CDS2396
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon tRNA_anti_2
Other DBs
NCBI-ProteinID: ASM78174
UniProt: A0A221KGL2
LinkDB
Position
2524064..2527633
AA seq 1189 aa
MPFVHLRTHTEYSVVDGTLRIDDAVKAAKKDGQPALAITDLANLFGAVKFYKACRGKGVK
PVIGTEVWLEPHDATDKFVPRVLLLVQNITGYHNLSELLARAWTSNVQRNQAWVKWEWLR
ELGEGLIVLSGFEFGPLAPALQAGDVARARSVATQLAELFPRRFYIEVQRGGLHHPEPLV
RASVQLAAQMQLPVVATHPVQFLEPDDFEAHEARVCVAEGETLGNPKRVKRFGREQYFKN
QAQMEALFADLPSAITNTLKIAERCSLTLVLGKPQLPNFPTPLLADGTPMPIDQFFREES
HKGLDYRLRQLFPDEAKRKAERPRYVERLEFELNTILKMGFPGYFLIVSDFITWAKNNGC
PVGPGRGSGAGSLVAYALLITDLDPLQYNLLFERFLNPERVSMPDFDIDFCQANRDRVID
YVKEKYGRPAVSQIATFGTMAAKAALRDIGRVLGMGFGHVDSIAKLIPAPPGKTVTLAPV
PAEPEKGLIYARQEAPELEEREKNEEEVAELLRLATRVEGMVRNIGMHAGGVLIAPGKIT
DFCPLYQQPGSDSAVSQFDKDDVEAIGLVKFDFLGLATLTILELAKEFIVTRYPDQKNFA
FENLPLDDKAVYKLFSDGLTEAVFQFESRGMQGMLRDAKPSRLEDLIALNALYRPGPMDL
IPSFVARKHGREPVEYPHPLVEWVLAETYGIMVYQEQVMQTAQVLGGYSLGGADMLRRAM
GKKKPEEMAEHRTIFRKGAAEKGISEEKADEVFDLMEKFAGYGFNKSHAAAYSLLAYHTG
WLKVHYTAEFFAANMTNELSDTDKLKVLLGDAVKNFKIEFEPPSVNRGVYRFEPLPGAEG
RRKIRYGLGAIKGTGQGAIEAIVANRESEGPFTSLFNFCQRVDKGRVNKRVVEALIKAGA
FDELHPDRGATLASVGLAFEWAQAQAANANQGGLFDAFGDDSHGSHTQEPPLMSVPAQSV
REKLTLEKAALGFYLSGHLFDQDEPEVRKFCKRRIADLVDARELQIVAGIVGEMRVVNGQ
RGRVGIFKLDDGSEPIETVVNEEQLDANKERLVEDALVIVQGKVQNDRFSGGLRLNATQV
WDLAAARARFGRCWSVMLPAGTLPTATQARQAVASLAQLLHQHPPRVEATELGDVAQGLT
VRLQLHRAGAVAELELGTQGRFWPSEAALSAWRTWAPEGATMGVVYEGT
NT seq 3570 nt   +upstreamnt  +downstreamnt
atgcccttcgttcacctgcgcacccacaccgaatactccgtcgttgacggcacgctccgc
atcgacgatgccgttaaagcagcgaaaaaagatggccagcccgcgctcgccatcaccgat
ttggccaacctgtttggcgccgttaagttctacaaagcgtgccggggcaagggcgtcaag
cccgtcatcggcaccgaagtctggctggagccgcacgacgcgaccgataaattcgtcccc
cgcgtgctgctgctggtgcaaaacatcaccggttaccacaacctgagtgaactgctggcc
cgcgcctggacaagcaacgtgcagcgcaaccaagcctgggtgaagtgggagtggctgcgc
gaactgggcgaggggctgatcgtgctgtcgggcttcgagttcgggccgctggcgccggcg
ctgcaagccggcgatgtggcccgcgcccgcagcgtggccacgcaactggccgagctgttc
ccgcgccgtttctacattgaggtgcagcgcgggggcctgcaccacccagagccactggtg
cgcgccagcgtgcaattggccgcccagatgcaactgcccgtcgtggccacccatccggtg
cagtttttggagccggatgatttcgaagcgcacgaagcccgcgtctgcgtggccgaaggt
gaaacgctgggcaaccccaagcgcgtgaagcgatttgggcgcgagcagtatttcaagaac
caagcgcagatggaggcgctgttcgccgacctgcccagcgccatcaccaacacgctcaaa
atcgccgagcggtgcagcctgacgctggtgctgggcaagccgcaactgcccaatttcccc
acgccgctgctggccgatggcacgcccatgcccatcgaccagtttttccgcgaggaaagc
cacaaggggctggactaccgcctgcgccagcttttccccgatgaggccaagcgcaaggcc
gagcgcccgcgttacgtcgagcgcctggagttcgaactgaacaccatcttgaagatgggt
tttccgggctacttcctcatcgtgtcggacttcatcacctgggcgaagaacaacggctgc
ccggtggggccgggccggggctcgggcgcgggttcgctggtggcgtatgcgctgctcatc
accgacctggatccgctgcaatacaacctgctgttcgagcgctttttgaaccccgagcgc
gtgtcgatgcccgactttgacatcgacttctgccaagccaaccgcgaccgggtgatcgac
tatgtgaaagaaaagtatggccgcccagcggtgagccagattgccaccttcggcaccatg
gcggccaaggcggcgctgcgcgacattggccgcgtgctgggcatgggctttggccatgtg
gattcgattgccaagctgattcccgccccgcctggcaaaaccgtgacgctggcgcccgtg
cccgccgagccggaaaaaggcttgatttatgcccgccaagaagccccggagctggaagaa
cgcgaaaagaacgaggaagaagtcgccgagctgctgcgcctggccacgcgggtggaaggc
atggtgcgcaacatcggcatgcacgcggggggcgtgctgatcgcgccgggcaagatcacc
gatttctgcccgctctaccaacagcccggctcagactccgccgtcagccagtttgacaag
gacgacgtcgaagccatcggcctggtgaagttcgacttcttgggtctggccacgctcacc
atcttggagctggccaaagagttcatcgtcacgcgctacccggatcaaaagaacttcgcc
tttgagaacctgccgctggatgacaaggcggtttacaagctgttctccgacgggctgacg
gaagccgtgttccagtttgaatcacgcggcatgcaaggcatgttgcgcgacgccaaaccg
agccggctggaagacctgatcgccctgaacgcgctttaccgccccggcccgatggatctg
attccgagctttgtggcgcgtaaacacgggcgcgagccggtggagtacccgcatccgctg
gtcgaatgggtgctggccgaaacctacgggatcatggtctaccaggaacaggtgatgcag
accgcccaggtgctgggcggctacagcctgggcggtgccgacatgctgcgccgcgccatg
ggcaagaaaaagcccgaggagatggccgagcaccgcaccatcttccgcaagggtgcagcc
gaaaaaggcatcagcgaagagaaggccgacgaggtcttcgacttgatggagaagttcgcg
ggctacggcttcaacaagtcgcacgcggcggcctattcactgctggcgtaccacacgggc
tggctcaaggtgcattacacggccgagttcttcgcggccaacatgaccaacgaactgagc
gacaccgacaaactgaaggtgctgctgggcgatgcggtcaaaaacttcaagatcgagttc
gagccgcccagcgtcaaccggggcgtgtaccggtttgagccgctgccgggtgcggaaggg
cgacgcaaaattcgctacgggctgggcgccatcaagggcacgggccaaggtgccattgaa
gccatcgtcgccaaccgcgaatccgaggggccgttcaccagcttgttcaacttctgccag
cgcgtggacaagggccgcgtgaacaagcgcgtggtggaagcgctcatcaaagccggcgcg
tttgacgagctgcacccggatcgtggtgccacgctggccagcgtcggcttggcattcgag
tgggcgcaggcgcaagcggccaacgccaaccaaggcgggttgttcgatgctttcggcgac
gacagccacggctcgcacacccaagaaccaccgctgatgagcgtgccggcacaaagtgtg
cgcgaaaaactcacgctggaaaaagcggcgctgggcttctacctctccggccatttgttc
gaccaagacgagcccgaggtgcgcaaattctgcaaacgccgcatcgcggatttggtggat
gcgcgggagctgcaaatcgtggcgggcatcgtcggggagatgcgggtggtgaacggccaa
cgtggccgggtcggcatcttcaaattggacgatggcagcgagcccatcgaaaccgtggtc
aacgaggagcagctcgacgccaacaaagaacggttggtggaggatgccctggtgatcgtt
cagggcaaggtgcagaacgaccgcttttcgggtgggctgcgcctgaacgccacgcaggtg
tgggatttggcggcagcccgggcacggtttgggcgctgctggtcggtgatgctgccagcc
ggcacgctgccgacagcgacgcaagcccgacaggccgtggccagcttggcgcagttgctg
caccagcatccgccccgcgtcgaggccaccgagttgggggatgtggcccaaggactgacg
gtgcgactccaattgcaccgggctggcgccgtggctgaactggagttgggcacccaaggg
cggttttggccttcggaagcagccttgagcgcttggcgcacctgggccccagaaggggcc
acgatgggcgtggtctacgaagggacgtga

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