Vitreoscilla filiformis: VITFI_CDS2520
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Entry
VITFI_CDS2520 CDS
T04960
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
vff
Vitreoscilla filiformis
Brite
KEGG Orthology (KO) [BR:
vff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vff03019
]
VITFI_CDS2520
03009 Ribosome biogenesis [BR:
vff03009
]
VITFI_CDS2520
Messenger RNA biogenesis [BR:
vff03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
VITFI_CDS2520
Ribosome biogenesis [BR:
vff03009
]
Eukaryotic type
Pre-60S particles
RNases
VITFI_CDS2520
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ASM78297
UniProt:
A0A221KHI6
LinkDB
All DBs
Position
complement(2666168..2666728)
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AA seq
186 aa
AA seq
DB search
MNAPTLPRHEQNLIWIDLEMTGLQPNSDRIIEIAVVVTDAQLTQRIEGPVFAVHQSDETL
DKMDAWNKGTHGKSGLIDRVKASTVSEAEAEEKVIEFLAQYLYKGKSPMCGNSICQDRRF
LANYMPRLEAFFHYRNLDVSTLKEIARRWHPSAVESFKKAQAHTAMADIHESIDELLHYR
AHLLKV
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccccgaccctgccgcgccacgaacaaaacctgatctggatcgatttggagatg
accggcctgcaaccgaacagcgaccgcatcatcgaaatcgccgtggtggtgacggatgcg
cagctcacccagcgcatcgaaggcccggtgttcgcggttcaccaaagcgatgaaacgctg
gacaaaatggatgcctggaacaaaggcacccacggcaaaagcgggctgattgaccgcgtc
aaggcttccacggtgagcgaggccgaggccgaagagaaggtcatcgagtttttggcgcag
tatctgtacaagggcaaaagcccgatgtgcggcaactcgatctgccaggatcgccgcttt
ttggccaactacatgccgcgtttggaagccttcttccactatcgcaacttggatgtgagc
accttgaaggaaatcgcccgccgctggcatccgagcgcggtggagagtttcaagaaagcc
caggcccacaccgcgatggcggacatccacgaatccatcgacgagctgctgcactaccgc
gctcatctgctgaaggtgtga
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