Aliivibrio fischeri ES114: VF_0595
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Entry
VF_0595 CDS
T00236
Symbol
ygdH
Name
(GenBank) conserved protein
KO
K06966
pyrimidine/purine-5'-nucleotide nucleosidase [EC:
3.2.2.10
3.2.2.-]
Organism
vfi
Aliivibrio fischeri ES114
Pathway
vfi00230
Purine metabolism
vfi00240
Pyrimidine metabolism
vfi01100
Metabolic pathways
vfi01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
vfi00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
VF_0595 (ygdH)
00240 Pyrimidine metabolism
VF_0595 (ygdH)
Enzymes [BR:
vfi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.10 pyrimidine-5'-nucleotide nucleosidase
VF_0595 (ygdH)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PpnN_C
DUF4478
Lysine_decarbox
LDcluster4
Motif
Other DBs
NCBI-ProteinID:
AAW85090
UniProt:
Q5E7A6
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All DBs
Position
I:complement(652798..654156)
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AA seq
452 aa
AA seq
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MITHISPAGSMDLLSQLEVDQLKKTASSELYRMYRNCTLAVLNSGSHTDSSKELLDKYQS
FDVAVTRRDRGIKLELNNPPEHAFVDGTIIKGIQEHLFSVLRDMVYVNMQIADHNRLNLT
KATHLTNLVFSILRNAKALHTGIEPNLVVCWGGHSINPVEYQYTREVGHELGLRELNICT
GCGPGAMEGPMKGAAIGHAKQRYNDSRFVGLTEPSIIAAEPPNPIVNELIIMPDIEKRLE
AFVRMAHGIVIFPGGPGTAEELLYILGIMMNPANRQQPMPIVLTGPKESEAYFRSIDTFI
RDTLGEEATHYYDIVIGDPAKAAVFINHGIKKVKEYRKATDDSYSFNWALKIEPEFQLPF
EPTHEAMSALDLHLNQPKETLAANLRQAFSGIVSGNVKAEGIAEIEKHGVFKLHGDPALM
KKMDRLLQDFVKQGRMKLPGSKYEPCYKIVMD
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgattactcatataagccctgcaggtagcatggatttgctatcacaattagaagttgat
cagttaaaaaaaaccgcttcaagtgaactttaccgtatgtatcgaaactgtacattagcg
gtattaaattcaggaagtcatactgatagctcgaaagaattattagataaatatcagtca
tttgatgttgccgttacgcgccgagatcgcggaattaaacttgaattaaataacccacca
gagcacgcattcgttgatgggactatcattaaaggtattcaagaacatctgttttctgtt
ttacgtgacatggtttacgtgaacatgcaaatcgctgatcacaatagactaaacctcacc
aaagctactcacctaactaacttagtatttagtatcttgcgtaatgcaaaagccttgcat
accggtattgagcctaacttagtcgtatgttggggcggacattcaattaatcctgtcgaa
tatcaatacactcgtgaagtcggtcatgaactaggtttacgtgaattaaatatttgtact
ggttgtggtcccggagcaatggaaggcccaatgaaaggagctgctattggtcatgcgaaa
caacgttataacgatagtcgatttgttggtctaaccgagccatcaatcattgcggcagag
ccaccaaaccctatcgtaaatgaacttatcattatgcctgatattgaaaaacgtttagaa
gcgtttgtacgtatggctcatggtattgttattttccctggaggcccaggaacggcagaa
gagttgctttatatcttagggatcatgatgaaccctgcgaatagacagcagcctatgcct
atcgttcttactggtccaaaagagagtgaggcttatttccgctctattgatacctttatt
cgcgataccttaggcgaagaagctactcactattatgatattgttattggcgacccagct
aaagcagcggttttcattaatcatggtattaagaaggtaaaagaataccgtaaagcaacg
gatgactcttatagctttaactgggcactaaaaattgagcctgaattccaattaccattt
gaaccaacccatgaagcgatgtcagctttagatttacatttaaatcagcctaaagaaaca
ttagctgccaacttacgtcaagcattctcaggaattgtatctggtaatgtgaaagccgaa
ggtattgcagagatcgaaaagcacggtgtctttaaactgcatggtgatcctgccttaatg
aaaaagatggatcgtttacttcaagactttgtaaaacaaggtcgaatgaagttaccgggt
tctaagtacgagccttgctataaaatcgttatggattaa
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