Aliivibrio fischeri ES114: VF_1481
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Entry
VF_1481 CDS
T00236
Name
(GenBank) penicillin binding protein transpeptidase
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
vfi
Aliivibrio fischeri ES114
Pathway
vfi00550
Peptidoglycan biosynthesis
vfi01100
Metabolic pathways
vfi01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
vfi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VF_1481
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VF_1481
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vfi01011
]
VF_1481
Enzymes [BR:
vfi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
VF_1481
Peptidoglycan biosynthesis and degradation proteins [BR:
vfi01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
VF_1481
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AAW85976
UniProt:
Q5E4S0
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All DBs
Position
I:1638591..1640501
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AA seq
636 aa
AA seq
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MSKQKTPFRNHQFETSLFNQRVIVAFLFMLVAIGGLVFNLYHLQVRNHDRYQVRSNRNRI
KIIPVAPNRGLIYDRNGVVLAQNIPVSTLELTPAKIDDINATLTSLQKLLNLSDHDIAKF
KKLMHRTRSTKPITLIEQMSEVQIAKFSVNQFHYNGTNINAYLERYYPYGESLTHVLGYV
GKINDRDIRTLKKDNRYTNYEGTHAIGKLGIELYYESTLHGKSGYQKVEINSHGRIVRTL
DYVAPIPGKDIKLNIDLGLQLYAYNQLKIKKENPITHKMEDYHRRGSIVVLDPRDDSVLA
MVSSPSYDPNLFVHGISSKHYNALLNNPDLPLLNRTTLGIYPPGSTVKPQIAVAALSEKV
ITPNTTTNFPGWWRIPHSKSRKFRDDIRWGHGEVNVVKAIEKSVDTFFYQVAYDMGIDRL
STWMNKFGYGKPSGIDIREESPANMPTRDWKHSNYHQAWYKGDTIPVGIGQGYWTATPMQ
IAKATAVIADEGIVHRPHLLKSVMEDGKFKPIIFKDFPKVNHTKKQYWNLAKEGMHRVIV
SGTARKLFQNLAYKAGGKTGTSQVFGLDKGEEYNSEDVAEHLRDHALFTSFAPLDKPKVL
VAAVLENAGWGKYAAPIGRNIMDYVLINPKISLDHT
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaacaaaaaacaccatttcgaaaccaccaatttgaaacatcattatttaatcag
cgtgtgattgttgcttttctatttatgttggttgctattggcggtttggtttttaattta
tatcacttacaagtaagaaatcacgataggtatcaggttcgctcaaatagaaatcgcatt
aaaataattcctgtagcaccaaatcgtggcctcatttacgaccgaaatggcgtcgtatta
gcgcaaaatatacccgtttcaactctagagttaaccccggcaaaaattgatgatatcaac
gcaactcttacctcattacaaaaattattaaatttaagtgaccatgacatagcgaaattt
aaaaaattaatgcatcgaacccgaagtaccaagcctattactctcatagagcaaatgagt
gaagtacaaattgctaaattttctgtgaatcaatttcattataatggcactaacattaac
gcctatcttgaacgatattacccatatggtgaaagcctcactcacgttttgggctatgtc
ggaaagattaacgaccgcgatattcgaactcttaaaaaagacaatagatacacaaattat
gaaggaactcatgctataggaaagttaggtattgagctctattatgaaagcacattacat
ggtaaatcaggctatcaaaaggtagaaataaacagccatggacgcatagtacgaactctt
gactatgtggcaccaataccaggtaaagacattaaattaaatattgatttaggcttgcag
ttatacgcctacaaccaactaaaaataaaaaaagaaaacccaatcactcataaaatggaa
gattatcatcgtcgtggttctattgttgttttagaccctagagatgactctgtattggcc
atggtatcgagccctagctatgatccaaatctatttgttcatggcatttcttcaaaacat
tacaatgcattattaaacaaccctgatcttccattattaaatagaacaactttaggtatt
tatcctcctggctctaccgtaaaaccacaaatagcagtagctgcattaagtgaaaaagtc
atcacaccgaatacaaccaccaactttcctggttggtggcgaattccacactcaaaaagt
cgtaaatttagagatgatatacgttggggtcatggtgaagttaatgtcgtaaaagccatt
gaaaaatcagtagataccttcttttatcaagttgcatacgatatgggaatagaccgatta
tcaacatggatgaataaatttggttatggtaaaccatcagggattgatataagagaagag
agccctgccaatatgcctactcgggattggaaacactcaaactatcaccaagcttggtat
aaaggcgatactatccctgttggaattggacaaggttattggactgcaaccccaatgcaa
attgcaaaagccactgcggttatagcagatgaaggcattgttcaccgaccacacttatta
aaatcagtcatggaagatgggaagtttaagccaataatatttaaagatttcccgaaagtt
aatcacactaaaaaacagtattggaatttagcaaaagaaggaatgcatcgagtaattgta
tctggtactgctcgaaaattatttcaaaatttagcttataaagctggtggtaaaacagga
acaagtcaggtatttggtttagataaaggggaggaatataattctgaagacgtcgctgaa
caccttcgtgatcatgctttgtttactagctttgctcctttagataagcccaaagtttta
gttgcggcggtattagagaatgctggttgggggaaatatgcagcccctattggtcgtaac
ataatggattacgtattaatcaatcccaaaattagtttagatcatacttag
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