KEGG   Vibrio fluvialis: AL536_12835
Entry
AL536_12835       CDS       T04379                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
vfl  Vibrio fluvialis
Pathway
vfl03030  DNA replication
vfl03430  Mismatch repair
vfl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vfl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AL536_12835
   03430 Mismatch repair
    AL536_12835
   03440 Homologous recombination
    AL536_12835
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vfl03032]
    AL536_12835
   03400 DNA repair and recombination proteins [BR:vfl03400]
    AL536_12835
Enzymes [BR:vfl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AL536_12835
DNA replication proteins [BR:vfl03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     AL536_12835
DNA repair and recombination proteins [BR:vfl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     AL536_12835
SSDB
Motif
Pfam: RNase_T RNase_H_2 CAF1
Other DBs
NCBI-ProteinID: AMF94362
UniProt: A0A120L3V1
LinkDB
Position
2:complement(1115394..1116110)
AA seq 238 aa
MKKLFQAPSINWPYKYRAKQNVVSHPSLQRFYSSALPDGNTPLGEVEFVAMDFETTGLSV
DKDEIITIGLVPFTLNRIYLKRGEHWTVRPRQKLDEHSIVIHGITHNDIMDAPDLSEIFE
QVLDQLAGRILVVHYHKIEREFLDRALRRRIGEGIEFPVIDTMEIEAMIQKRHTAGLWNR
LRGKKPESVRLGQSRMRYGLPAYTPHHALTDAIATAELLQAQIAHHFSADQPVRQFWL
NT seq 717 nt   +upstreamnt  +downstreamnt
atgaagaaactgtttcaggcgccaagtatcaactggccctataaatatcgtgcaaaacaa
aacgtggtcagccaccctagcctgcagcgcttttattcttctgctctgccggatggcaat
accccgctcggcgaggtggaatttgtcgcgatggactttgaaaccaccggccttagcgta
gataaggatgaaatcatcaccatcggcctggtgccgtttaccctaaaccgcatttacctg
aaacgtggcgagcactggacggttcgcccacgtcaaaaactcgatgaacattccattgtc
attcatggcattactcataacgacatcatggatgcgccagatctgagcgagatttttgaa
caggttcttgaccagctggcaggccgaattctggtggtgcactatcacaaaatcgagcgt
gaatttcttgaccgtgcacttagacgacggattggtgaaggcatcgagtttcctgtcatt
gatacaatggaaatcgaagccatgattcaaaaacgccacactgccggactctggaatcga
ctgcgtggcaaaaagccagaatccgttcggctcggccagtcacgtatgcgttatggcttg
cctgcctatacaccgcaccacgcactaaccgacgcgattgcgacagctgaactgctgcag
gcgcaaattgcacatcatttctctgcagatcaaccggttcgtcaattctggttgtaa

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