Vibrio fluvialis: AL536_12835
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Entry
AL536_12835 CDS
T04379
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vfl
Vibrio fluvialis
Pathway
vfl03030
DNA replication
vfl03430
Mismatch repair
vfl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vfl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AL536_12835
03430 Mismatch repair
AL536_12835
03440 Homologous recombination
AL536_12835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vfl03032
]
AL536_12835
03400 DNA repair and recombination proteins [BR:
vfl03400
]
AL536_12835
Enzymes [BR:
vfl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AL536_12835
DNA replication proteins [BR:
vfl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AL536_12835
DNA repair and recombination proteins [BR:
vfl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AL536_12835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
CAF1
Motif
Other DBs
NCBI-ProteinID:
AMF94362
UniProt:
A0A120L3V1
LinkDB
All DBs
Position
2:complement(1115394..1116110)
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AA seq
238 aa
AA seq
DB search
MKKLFQAPSINWPYKYRAKQNVVSHPSLQRFYSSALPDGNTPLGEVEFVAMDFETTGLSV
DKDEIITIGLVPFTLNRIYLKRGEHWTVRPRQKLDEHSIVIHGITHNDIMDAPDLSEIFE
QVLDQLAGRILVVHYHKIEREFLDRALRRRIGEGIEFPVIDTMEIEAMIQKRHTAGLWNR
LRGKKPESVRLGQSRMRYGLPAYTPHHALTDAIATAELLQAQIAHHFSADQPVRQFWL
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaactgtttcaggcgccaagtatcaactggccctataaatatcgtgcaaaacaa
aacgtggtcagccaccctagcctgcagcgcttttattcttctgctctgccggatggcaat
accccgctcggcgaggtggaatttgtcgcgatggactttgaaaccaccggccttagcgta
gataaggatgaaatcatcaccatcggcctggtgccgtttaccctaaaccgcatttacctg
aaacgtggcgagcactggacggttcgcccacgtcaaaaactcgatgaacattccattgtc
attcatggcattactcataacgacatcatggatgcgccagatctgagcgagatttttgaa
caggttcttgaccagctggcaggccgaattctggtggtgcactatcacaaaatcgagcgt
gaatttcttgaccgtgcacttagacgacggattggtgaaggcatcgagtttcctgtcatt
gatacaatggaaatcgaagccatgattcaaaaacgccacactgccggactctggaatcga
ctgcgtggcaaaaagccagaatccgttcggctcggccagtcacgtatgcgttatggcttg
cctgcctatacaccgcaccacgcactaaccgacgcgattgcgacagctgaactgctgcag
gcgcaaattgcacatcatttctctgcagatcaaccggttcgtcaattctggttgtaa
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