Vibrio fluvialis: AL536_20700
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Entry
AL536_20700 CDS
T04379
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
vfl
Vibrio fluvialis
Pathway
vfl03030
DNA replication
vfl03410
Base excision repair
vfl03420
Nucleotide excision repair
vfl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vfl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AL536_20700
03410 Base excision repair
AL536_20700
03420 Nucleotide excision repair
AL536_20700
03440 Homologous recombination
AL536_20700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vfl03032
]
AL536_20700
03400 DNA repair and recombination proteins [BR:
vfl03400
]
AL536_20700
Enzymes [BR:
vfl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AL536_20700
DNA replication proteins [BR:
vfl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AL536_20700
DNA repair and recombination proteins [BR:
vfl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AL536_20700
NER (nucleotide excision repair)
GGR (global genome repair) factors
AL536_20700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AMF95767
UniProt:
A0A0X8LPL1
LinkDB
All DBs
Position
2:2810902..2813700
Genome browser
AA seq
932 aa
AA seq
DB search
MARIPDNPLILIDGSSYLYRAFHAYPGTMSNGEIPTNAVYGVINMVRAMMRQFASDRMAV
VFDAKGKTFRDDLYPEYKAHRPPMPDDLRCQIEPLHKVIRAMGLPLLSIEGVEADDVIGT
LAHQASQAGIPVLISTGDKDMAQLVDDNITLINTMTNVVMDREGVIEKFGIPPELIIDYL
ALMGDKVDNIPGVPGVGDKTATALLQGIGGLTALYDNLDKIADLGFRGSKTMAKKLEDNR
ANAELSYELATIKLDVELDCTPETLLKATPDRDALIELYGQLAFKSWLTELLDGGTGVVE
AAEKSAASAAVSGTPKAAPAADMAAVKIDRSHYETIVDEAAFSRWLDKLRSAEVFAFDTE
TDSLDYMVANLVGVSFAVAEGEAAYVPVAHDYLDAPQQLDRDWVLAQLKPILEDAQQAKV
GQNLKYDASVLARYDIDMRGIAHDTMLASYVYNSVAGKHDMDSLALRFMQHSCISFEQVA
GKGKNQLTFNQIDLEQAAPYAAEDADVTLCLHHRLLPLLEQDDKLLSVYRNIEMPLVPVL
SRIERTGVLINDMLLGAQSQEIAQRLDELEKKAFDIAGQEFNLSSPKQLQTIFFEQMKLP
VIKKTPSGTPSTNEEVLQELALDYPLPAVILEYRGLAKLKSTYTDKLPKMINPTTGRVHT
SYHQAVTATGRLSSTDPNLQNIPIRNEEGRRIRQAFIAPHGWKIMAVDYSQIELRIMAHL
SGDKALLEAFQQGKDIHAATAAEILGISIDQVTSEQRRRAKAVNFGLIYGMSAFGLAKQL
GIPRGEAQAYMDTYFERYPGVMQYMEDTRSTAAEQGYVETLFGRRLHLPEITSRNGMRRK
AAERAAINAPMQGTAADIIKKAMLLVDEWIEAEGAGRVKLLMQVHDELVFEVEESALSEI
ESKVQKLMESAAELKVPLVAEAGHGDNWDEAH
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcatccctgataacccgttaattctgatcgacggctcttcttatttataccgc
gcatttcatgcctacccgggcacgatgagcaacggtgagatcccgactaacgctgtgtat
ggcgtgatcaacatggttcgcgccatgatgcgtcagttcgccagtgatcgaatggcggtc
gtctttgatgccaaaggcaaaaccttccgcgatgatctgtaccctgagtacaaagcgcat
cgtccgccaatgccggatgatttgcgttgtcagatcgaaccgctgcataaagtgattcgt
gccatggggctgccactgctgtcgattgaaggtgtggaagcggacgacgtgatcggcacg
ctggctcatcaggcgtctcaggcgggcattccggtgctgatcagtacgggcgataaagat
atggcccagctggtggacgacaatatcaccctgatcaacaccatgactaacgtcgtgatg
gatcgcgaaggcgtgattgaaaaattcggtattccgccggagctgatcatcgattacctc
gcgctgatgggcgataaagtcgataacattccgggcgtgccgggggtgggtgataaaacc
gcgaccgcgttgctgcaagggatcggtggcctgacggcgctgtacgacaatctggataaa
attgctgacctgggtttccgtgggtccaaaaccatggctaagaagctggaagacaaccgt
gctaatgccgagctgtcttacgaactggcgaccattaaacttgatgtcgagctagattgc
acgccagaaaccttgctcaaagccaccccggatcgcgatgcgctgattgaactttacggc
cagctggcgtttaaatcttggttgaccgagctgcttgatggcggcaccggtgtggtcgaa
gcggccgagaaaagcgcggctagcgccgctgtcagcggcacacctaaagccgcgcctgca
gcggatatggccgcagtgaaaatcgatcgcagccactatgagactattgtggacgaagcg
gcattcagccgttggctcgacaaactgcgcagcgctgaggtgtttgcgtttgataccgaa
accgacagcctcgattacatggtggccaatctagtgggtgtctctttcgcagtcgcggaa
ggtgaagccgcctacgtgccggtggcgcacgattatctggatgcgccacagcaactcgat
cgcgattgggtgctggcacaactgaaaccgattttagaagatgcgcagcaagccaaagtc
ggccagaacctcaagtacgatgccagcgttctggcgcgttatgacatcgacatgcgcggc
attgcgcacgacaccatgctcgcgtcatacgtctacaacagcgtggctggtaagcacgat
atggacagcctagcgctgcgtttcatgcaacacagctgcatttcgtttgagcaggtggcg
ggtaaaggtaagaatcaactgacctttaaccagattgaccttgaacaagcggcgccttac
gccgcagaagatgccgatgtcacgctgtgtttgcatcatcgtctgctgcctttgttggag
caagacgacaaactgctgagcgtgtatcgcaacatcgagatgccactggtgccggttctg
tcgcgcattgaacgcactggcgtgctgatcaacgacatgctgctgggcgcacaatcgcaa
gagattgcgcagcgtctggatgagctggagaagaaagcgttcgacatcgcgggccaggag
tttaacctcagctcgccaaagcagctgcaaactatcttttttgaacagatgaaactgccg
gtgatcaagaagacaccatccggtacgccatcaaccaacgaagaagtgctgcaagagctg
gcgctggattacccgttaccagcggtcattctcgaataccgcggtctggcgaagctcaaa
tcgacttacaccgataaactgccgaagatgatcaacccgaccacgggccgcgtgcacacc
tcgtatcatcaggcggtcactgcaaccgggcgcctctcttcgaccgatccgaacctgcag
aacattccgattcgtaatgaggaaggtcgtcgcattcgtcaggcgttcatcgcgccgcat
ggttggaaaatcatggcggtcgactactcgcaaatcgagctgcgcatcatggcacacctg
tcgggcgataaagcgctgttggaagccttccagcaaggtaaagatatccacgccgccacc
gcggccgaaattctgggtatcagcatcgatcaggtaaccagtgaacagcgtcgccgtgcc
aaagcggtcaactttggcctgatctacggcatgagcgcgtttggcctggcgaaacaactg
ggcattccgcgtggcgaagcgcaagcgtacatggacacttactttgagcgttaccctggc
gtgatgcaatacatggaagacacacgcagtaccgctgcagagcagggttacgtggaaacc
ttgtttggtcgtcgtctccatctgccggaaatcacttcgcgtaacggtatgcgccgtaaa
gcggcggaacgtgcggcgatcaacgcgccgatgcagggcaccgcggccgacattatcaaa
aaagcaatgttgctcgtggatgagtggatcgaagcggaaggtgcagggcgcgttaagctg
ttgatgcaggtacacgatgaactggtgtttgaagtcgaagagtcagctttgtccgaaatt
gaaagtaaagtacagaaactgatggaatctgcggcagagctgaaggtgcctttggtggct
gaggcagggcatggcgataactgggatgaagcacattaa
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