Aliivibrio fischeri MJ11: VFMJ11_0576
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Entry
VFMJ11_0576 CDS
T00754
Name
(GenBank) ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
vfm
Aliivibrio fischeri MJ11
Brite
KEGG Orthology (KO) [BR:
vfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vfm03009
]
VFMJ11_0576
Enzymes [BR:
vfm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
VFMJ11_0576
Ribosome biogenesis [BR:
vfm03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
VFMJ11_0576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
TruB_N
Motif
Other DBs
NCBI-ProteinID:
ACH66510
UniProt:
B5FAQ8
LinkDB
All DBs
Position
I:600470..601444
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AA seq
324 aa
AA seq
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MAQQIELTSTVKESQLGQRLDQAAAELFSDFSRSRIKEWLLAGNMTVNGEVVTKARLKVM
GGEEITVKAELEDEERWLAQDISLDIVYEDDDLLVINKPRDFVVHPGAGTPDGTVLNALL
FHYPNIAEVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVRALQKRKITREYEAVVVGRMT
AGGMIEKPIGRHPNKRTLMAVHELGKDAVTHYRVAEHFRIHTRIRLRLETGRTHQIRVHM
SYLQHPLVGDTAYGGRARIPKGASQELIDMIRGFDRQALHAAMLRFEHPITGETMEFHAP
IPDDMIALSQALRDDERLMHEEEY
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggcacaacaaatagagttaacaagtacagtaaaagaaagtcaactagggcagcgttta
gatcaagctgctgctgagttgttttctgatttttctcgttcacgcatcaaagagtggttg
cttgctggcaacatgacagtcaatggtgaagtggttacaaaagcacgccttaaagttatg
ggtggtgaagagatcacggttaaagctgaattagaagatgaagagcgttggttagctcaa
gatatttctcttgatattgtttatgaagatgatgatctactcgttatcaataaaccacgt
gacttcgttgttcacccaggagcgggtacacctgatggtacagtgttaaatgcattgtta
ttccattatccaaatattgcagaagtacctcgtgcaggtatcgttcaccgtttggataaa
gacactactggattaatggttgttgcgaaaactgtaccggctcaaacacgtttagttcgt
gcgcttcaaaagcgtaagattactcgtgagtatgaagccgttgttgtcggtcgtatgact
gcgggtggtatgattgagaaaccaattggccgccacccaaacaaacgtactctaatggca
gttcatgaattaggtaaagatgctgtgacacattaccgtgttgctgaacatttccgtatt
catactcgtatccgtttacgtcttgaaaccggtcgtactcaccaaattcgtgtacatatg
tcatatttgcagcatccacttgtgggtgatactgcttatggtggtcgtgctcgtattcca
aaaggcgcttctcaagagttaattgatatgatccgcggttttgatcgtcaggctctgcat
gctgcgatgctgcgttttgaacatccaatcacaggggaaacaatggagttccatgctcca
attcctgatgacatgattgctttatctcaggcgctacgtgatgatgaacgtctaatgcat
gaggaagagtattaa
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