Viruses: 5076497
Help
Entry
5076497 CDS
T40000
Symbol
TaroVCV_gp6
Name
(RefSeq) Taro vein chlorosis virus; L
KO
K26704
Rhabdoviridae RNA-directed RNA polymerase
Virus
2908018
Taro vein chlorosis virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
Vog
Vog cluster
Motif
Pfam:
Mononeg_RNA_pol
Mononeg_mRNAcap
Motif
Other DBs
NCBI-GeneID:
5076497
NCBI-ProteinID:
YP_224083
RS:
NC_006942
LinkDB
All DBs
Position
NC_006942:6154..11940
Genome browser
AA seq
1928 aa
AA seq
DB search
MDSDYPDLDPEALTVLDSIREGIQDEEEEDNNDKILSGTGDYHLKSALRTLDDMTRHPIF
NKEYQKAVRHFGISPTMMMTPTAVLKLTVSQTKINKAVGFLFGDILVRLDSLPWAVDCYD
SIQAEIKTMHSHMMIFATPSWVEDVHNKVSSLVEYDHDATLIWATVITLKNYLPAWREKG
ASLLDWRSVQYDPESEYLVMKVDRDFIIYVGSDICVMEIGKQTLWAPVPYILNGADKVAE
RYNVKYYCALCDELDIPDRISLEKLNQIIEVGDDCLQALGNKGYDIIGSYEALLAGIIQA
RDNPQVIPDRELLQRTTLNDPGNTIGVTFLKRWDALMEDLNPEQIACAHGLYRIWGHPAV
DILGGINKMREVASIVKLPSSKILTDIGRQFKEMFFTSYHSVHKHYPKHLIREYKSDSYI
HECLKDNRTLNSKVLSYHFPDWDSVALEKNFEVPYSWNLVHNLKDKAISPSRSELYETLS
TRNSIFGASNRRGILKSLTMETVQLRAFLQDVNDKGLPDNDKIIGVYPKERELKIKARLF
SLMSFKLRLYFVSTEALLGDKILKYFPQITMSLDMLSMIKKMFRVSGQTTRGDDSVTVIF
NLDFVKWNLQMRKIICSPVFTQLGALFGMPNLFDITHDLFRESVIYLCSGEGDLRGDPVF
GVAPDGVWSWTGDESGKEGLRQKGWTILTVVTIMLIAKRHHVDVSLMGGGDNQVLGITIG
GMVRDSVGELTQDSCKLAQCTIKRFTQDLITTFGDLGLPLKASETWVSDSLFMYNKHMFY
KGMPLRSPLKAVSRIFPLANDSIMTLDNMINNISSGVKAACMKERHGIPLVFIKTMAYRR
VAELSLIMHPLTVCFKKPELPDHGIVARSGKKLKIPVTSKNLRQYFSLCTLGSSTMGHPG
TLHLPDIIMRGFPDPLTSHLSFISEMRRYIVDPGLASVVDKLSHLSTSPTTEYAKLVEDP
TSINHDAPTHGLNEIRQMSRDFLMSTTLATNPHLKSLFSLLDRGTEKDFYDALCSAQELD
VKVLHEIAGATLYGYTNGIASRIDQTGTVRALNENIDVLRRLALAETRYIGYLMARDTRE
HDLKPSSCSRITAQQYRDLSWRKPILGVTVPHPMEMCQIMSSTETIYHDAVVCWSDRVSG
SEIYQSMGQGKIYQGSYTKERFKATDIAAAYGNEDILVKAVRLQKLINWRYDEGSNFAKI
ISLTLEAITDANTEGFHRSKEEIKGEFDHRRGVTGDISGGIPNFLVTPTSHFSSTTSSWV
SHSRGGKNENIHFQSVLINLLYRAMVYRGSVPGLPEMIWYSKEKCSDCITEIKDPDPIKT
TPSLHTLPSAKGNPFAYIESVNVKLDYHHQIEITKGMEEEYLINSLWDGQNVSGEEESGL
LLYLMLIGSRQISESFILLMRERINAATALQYMLNRVILARKLGLDSQFPIRSTSCVNLL
LGTDDNILSCRDRFNIELLSGSWESGVSCDMSVLYRDDLLTASELHVNVYLQNVPLQLAL
SRAASSTQLQSCLECQAIVLDRPSQRELMRYLHWCCPYHTANAPPRILRIHSEKLIKGIE
LRTDNPLLVPYVCNPVTLERVEKVPVMVDSWELPVHMHSTWDSILPQLYLTLKSLLSQVT
ISSLIVDDDITLINLAASVMLDLRRELPVYINVKGFSGTEINNKFDNLKLLPPNIRSSVS
VYHENRSLIEASAAVWLPEPSSVESVGADWLVLWGDTWRMGAGVPGHVLVTESKLSTGMA
WVLHRDPLASQSVLELCGAVQIWEKKALDWDMREGHCVPIQMNRTLACSRLGSRGVRWTM
WSTAAGLDKVTRILRSKLLSLSGNPGSSYHWRKGCQKILKAYVLSLYAHCVDNMLEASGR
LVGVSVHGSLSGIVPICDMHSSDRIQRAQYLFLKERCQGGPFILRNRLERRINLLSPVHD
LLDGPSQS
NT seq
5787 nt
NT seq
+upstream
nt +downstream
nt
atggattcagattatcctgaccttgatcctgaagcattaacagtgttggacagcattcga
gagggcatccaggatgaagaggaggaagacaacaatgataagatactcagtggcacaggg
gactatcatctcaaatctgccctgcggaccttagatgatatgacaagacatcccatcttc
aacaaggaatatcaaaaggctgttcgtcacttcgggatatctcctaccatgatgatgaca
cctacagctgtgttgaagctcaccgtgtcacagacgaagataaacaaagcagtagggttt
ctatttggggacatattggtccgtttggactccttaccttgggcagttgattgttatgac
agcatccaggcggagataaaaacaatgcattcacatatgatgatatttgcaacaccatca
tgggtggaagatgtacataataaagtgagttccctggtagagtatgatcatgatgccacc
cttatttgggctactgtcataactttaaagaattatcttccggcatggagggagaagggg
gcttctttgctggattggagaagtgtacaatatgacccggaatcagagtacctggtaatg
aaggtagacagggatttcatcatttatgtggggtccgacatctgtgtcatggaaattggg
aagcaaacactgtgggcacccgtcccttatattttgaatggggcggataaggttgcagaa
agatacaatgttaaatattattgtgccctttgtgatgagttggacattcctgacagaatc
tcattggagaagctgaaccaaattattgaagtaggtgatgattgtttgcaagccctagga
aacaaagggtatgatataatcgggtcatatgaagccctcctagctgggatcatccaggcg
agagataacccgcaggtaatccctgatcgggagctactacagaggacaactctcaatgac
cctggtaatactataggagtgacatttctgaagaggtgggatgcactcatggaagacctt
aacccagaacagattgcctgcgctcatggattgtacaggatatggggccatccagcagtg
gatatcctcggggggatcaataaaatgagggaggtggcatcaattgtgaagcttccctcc
tccaagattcttactgatattggaagacagttcaaagagatgttttttacttcctaccat
agtgttcataaacattaccctaagcatcttatacgagagtacaagtctgactcatatatt
catgagtgtttgaaggataataggaccctgaacagtaaggtcctgagctatcattttcct
gattgggactcggtagcacttgagaagaattttgaggtgccttattcctggaatctggtg
cacaatttaaaagacaaagctatttccccaagtaggtctgagttatatgagaccttgagc
accagaaattccatatttggtgcatcgaacaggaggggaattctcaagtcactgacaatg
gaaactgtccaattaagagcattcttacaagatgtgaatgacaaaggactcccggacaat
gacaagattataggggtctaccctaaagaaagagagttaaaaataaaggctagactcttc
tctctcatgtcattcaagttgagactgtattttgtatcaacggaggcactgctgggggac
aaaatccttaagtattttccccagatcactatgtcgctggacatgttgtccatgataaag
aagatgttcagggtctccggacaaacaacacggggggatgactctgtgacagtgattttc
aacttggattttgttaaatggaatctccagatgaggaagataatatgctctccagtgttc
acccaattaggggccttgttcggcatgcctaatttgtttgacattacgcatgatttgttc
cgagagagtgtgatttatctgtgttctggggagggcgatcttaggggagatcctgtattt
ggagttgctccagatggagtctggtcatggacaggggatgagtcyggtaaagaggggctg
agacaaaaggggtggaccatcttgacggtggttacaatcatgctgattgcaaagcgacat
catgtagatgtgtcgctaatgggaggaggggacaatcaagtactgggtatcaccatagga
gggatggtcagagattctgtcggggagctgacccaggactcatgcaagttggcccagtgc
acaatcaagagatttacccaagatctgatcacaacattcggggacttgggtctccctcta
aaagcttctgaaacctgggtgagtgactccctatttatgtacaacaaacatatgttctac
aagggaatgcctctacgatctcccctcaaggcagtgtccagaatattcccactggctaat
gattcaatcatgaccctggacaacatgataaacaacatatcatctggggtcaaggcggca
tgtatgaaagagcggcatggaatacccttagtcttcattaagaccatggcatatagaaga
gtggcggaattgtctttgattatgcatcctctcaccgtctgcttcaaaaagcccgagttg
ccagatcatggaattgtagctaggtctggtaagaagctgaagatcccagtgacatcaaag
aacttaaggcagtacttcagcctgtgcacattaggaagctctacaatgggtcatccaggg
acgctgcaccttccagacatcatcatgcgagggttccctgatcctctaacgagtcactta
tcattcatctcggagatgagaaggtatatagttgatccagggctagcatctgttgtggac
aagctgagtcatttgagcacctcacctacaacagagtatgccaaacttgtagaggacccc
acctctatcaatcatgatgctcctactcatgggctgaatgaaatacgccagatgtccagg
gattttctcatgagcactactctagctaccaatccccatctgaagtcactattctctttg
ctagacagagggacagagaaggacttttatgatgcactatgttcagcccaagaacttgat
gtgaaggtgttgcatgaaatcgccggggcaactctttatgggtacacaaatggaatagca
tcaagaatcgatcagacggggactgtccgtgctctgaatgagaatatagatgtcctccgt
aggctagcactagcagagaccaggtatattgggtacttgatggcaagagacacccgagag
catgacctgaagccttcttcatgttctcgcataaccgctcaacagtatcgggatctgtct
tggaggaagcccatattaggggtgacagtcccgcacccaatggaaatgtgccagatcatg
agttctacagagaccatttaccatgatgcagttgtatgctggagcgatagggtaagtgga
tctgagatatatcaatctatgggccaagggaagatatatcaaggttcttatacaaaagag
cggtttaaagcaacagatatagctgctgcttatggaaatgaagacatccttgtcaaagca
gtaagattacagaaattaatcaattggagatatgatgaggggagtaattttgcaaagatc
atcagtctgaccctagaggcaatcacagatgctaacacagaggggttccatagatcaaag
gaagagattaaaggagagtttgatcatcggaggggggtcaccggagacatcagcggaggg
atcccgaactttctagtcactcccacgtcccacttctcaagtaccacatcatcatgggtg
tcccatagcagaggagggaaaaacgaaaacatccacttccagagtgttctgataaatctg
ttatatagggccatggtctatcggggttctgtgcctgggcttcctgagatgatctggtat
tcaaaggagaaatgtagtgactgcataactgagattaaggaccccgatcctattaaaact
accccctccctgcacactcttccttcagccaaagggaacccatttgcatatattgagtca
gtgaatgtaaagctggattatcatcatcaaatagaaatcactaaggggatggaggaagaa
tatctcatcaactctctttgggacggccaaaatgtgtcaggcgaggaggagtcagggctg
ctgctttacctcatgttgataggatccaggcagatatcagaatcgttcattctcctaatg
agagagagaatcaatgctgcaacagcattacaatacatgctgaatagggtcatattagcc
aggaagcttggacttgattcacagttcccgataagatcaacatcatgtgtgaatttactt
ttggggactgatgacaatattttatcttgtcgggatcggttcaacatagagttattgtct
ggatcctgggaatcaggagtgtcttgtgacatgtctgtactgtatcgagatgacctcctg
acagcctcagaattacatgttaatgtctaccttcagaatgtccctctgcagttagctctt
agtagagcagcatcatccactcagctgcaatcctgcctagagtgtcaggcgatagtgctg
gacaggccgtcccaaagagagttgatgagatatctgcattggtgctgcccataccatact
gctaatgcccctccaagaatcctccgaatacatagcgaaaaattgataaagggcatagag
ttgaggacagacaatccattgctggtcccatatgtgtgtaatcctgtaacgttagagcgt
gtggagaaggttccagtgatggtcgactcttgggagctgccagtgcacatgcattcaaca
tgggacagtatactaccccagctttatctgaccctcaaatcgctcctgtcccaagtaaca
atatcctctcttatagtggatgatgacatcaccctcataaacttggctgcaagtgtcatg
ctggatcttaggagggagcttccagtgtatatcaatgtgaagggattttcaggaacagag
ataaacaataaattcgacaatctgaagctcctgccacccaatatcaggagctcggtcagt
gtctaccatgaaaatcggtctctgatcgaagcatcagcagcagtgtggcttccggagccc
tcttcagtggagagtgttggtgcggattggctggtgctctggggagacacttggagaatg
ggagcgggtgtaccagggcatgtattggtgactgagagcaaattaagtactggcatggca
tgggttctccatagggatccgctcgcatctcagtctgtgctggagttgtgtggcgctgtg
caaatatgggaaaagaaggctctggattgggacatgcgggaaggacactgtgtacccatc
cagatgaacaggacgctggcatgttctcggctcgggtcccgcggggtaaggtggacgatg
tggtctacagctgcaggactagataaagttaccaggatactaagatctaagctattatct
ctatcaggcaaccccggatcttcatatcattggaggaagggatgtcaaaagatacttaaa
gcttatgtcctgtccttatatgctcattgcgtggacaatatgctggaggcgtctggaaga
ctggtgggagtctctgtgcacgggtccctttctggaattgttccgatctgtgatatgcat
tcatccgataggatccaacgtgcacagtacttattccttaaggagaggtgtcaaggagga
ccatttattctgcggaatcgtttagaaagaaggatcaatctgctgtcccccgttcacgat
ctcctggacggtccatcccagtcctag
DBGET
integrated database retrieval system