Vibrio gazogenes: BSQ33_08225
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Entry
BSQ33_08225 CDS
T04933
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
vga
Vibrio gazogenes
Pathway
vga00300
Lysine biosynthesis
vga00470
D-Amino acid metabolism
vga01100
Metabolic pathways
vga01110
Biosynthesis of secondary metabolites
vga01120
Microbial metabolism in diverse environments
vga01230
Biosynthesis of amino acids
Module
vga_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vga00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BSQ33_08225
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BSQ33_08225
Enzymes [BR:
vga01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
BSQ33_08225
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
PH1_SSRP1-like
Motif
Other DBs
NCBI-ProteinID:
ASA55689
UniProt:
A0A1Z2SET6
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All DBs
Position
1:complement(1809213..1810043)
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AA seq
276 aa
AA seq
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MHFHFSKMHGLGNDFMVVDCITQNIFFSPDLIRRLANRHTGVGFDQLLLVEAPYDPETDF
HYRIFNADGSEVEQCGNGARCFARFVRLKGLTNKYSVHVSTKKGKMILNVEDDNQITVNM
GLPEFEPAKIPFKAKQSEKTYILRIAEQTLFCGAVSMGNPHVVTTVEDVDIADVDRLGPL
LESHERFPERVNAGFMQVVNPNEIRLRVYERGAGETQACGSGACAAVAVGIIQEQLAENV
TVHLPGGDLKISWKGPGQPLYMTGPATHIYDGQIAC
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcattttcatttttctaaaatgcacggtttgggtaatgacttcatggtcgttgattgt
attacccagaatattttcttctcaccggatttgattcgtcgcttagcaaaccgacacaca
ggtgtcggttttgaccaactgttattggttgaagcgccttatgatccggaaacagatttt
cactatcgaatcttcaatgcggatggcagtgaagttgaacagtgtggaaatggtgctcgt
tgttttgcgcgctttgttcggctcaaaggtttgacgaacaaatacagcgttcatgtcagt
accaagaaaggaaagatgattctgaatgtcgaagacgacaatcagattaccgtgaatatg
gggttgccagaattcgaacccgcaaaaatcccgtttaaggcgaaacagtcagaaaagacc
tatattttacgcattgctgaacagacactgttttgtggtgcggtaagcatgggtaatcct
catgtggtgacaacggttgaggatgtcgatattgcagatgtggaccgtcttgggccatta
ctggaatcccatgaacgttttcctgaacgcgtcaatgccggttttatgcaggtcgtgaac
cctaatgaaatccggttacgggtttatgaacgcggggcgggtgaaacacaggcgtgcggc
agtggtgcttgtgccgcagttgctgtcgggattattcaagagcagttggcagagaatgtc
accgtacatttgccgggtggcgacttgaaaattagctggaaggggccggggcaaccgctc
tatatgaccggacctgccactcatatttatgatggtcagattgcgtgctga
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