Vibrio gazogenes: BSQ33_16910
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Entry
BSQ33_16910 CDS
T04933
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
vga
Vibrio gazogenes
Brite
KEGG Orthology (KO) [BR:
vga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vga03016
]
BSQ33_16910
Enzymes [BR:
vga01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
BSQ33_16910
Transfer RNA biogenesis [BR:
vga03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BSQ33_16910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
Motif
Other DBs
NCBI-ProteinID:
ASA57443
UniProt:
A0A1Z2SJS9
LinkDB
All DBs
Position
2:complement(262394..264391)
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AA seq
665 aa
AA seq
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MFQDNPLLAQLKQQIQENLPKKEGTIKATDKGFGFLEIDSKNSVFIPPPYMKKSMHGDKV
IAIIRTENERDVAEPQELLEPALSRFIGRVKLHKGKLNVAPDHPQLKKQPLKAKVRKGLD
PNTIAENDWVVAQLTRHPLKGDNGFFVEITHKITDADDKIAPWWVTLAANDLPNQEPEGI
ENWEQKDDPALTRVDLTDIPFVTIDGASTQDMDDALYAKRTESGDFELTIAIADPTAYIT
PDDQMDKVARERGFTIYLPGRNIPMLPRELADNLCSLREGEIRPALCCTVTVAQDGTLQD
DIRFFSAHIQSHARLVYDHVSDWLELGESSDWTPSDDIAQVVRDLYAFSQARSSWRETHA
VVFPDRPDYRFELSEDNDVIAIHADMRRSANRLVEEAMVTANVCAGKVLQQQFGTGVFNV
HDGFKTERIADVITLITEHGMSDHTDETVKTLTGFSALRRWLATQDTSYLDNRIRKFQSY
SEISNQPAPHFAMGLDVYATWTSPIRKYGDMINHRLLKSYIMGKPPVQLPDELVGEELAI
HRKHHKIAERSVSDWLYARTLAEEPQKQTRYHAEIFDINRAGMRIRLLENGATAFVPAPL
IMANKERIECHADQGYIYIDKALVYKLGDTLEVTLNEVNQENRNIIAKPTAVFAEPPQSD
VSETA
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagacaatccattacttgcccagttaaaacaacagattcaggagaatctgccg
aaaaaagaagggaccattaaagcaactgataaaggtttcggctttttggaaatcgacagt
aagaacagtgtctttatcccacctccctacatgaaaaaatcaatgcatggcgataaagtt
attgcaatcatccgcaccgaaaacgaacgtgatgttgccgaaccacaagagttactcgaa
cctgctctctctcgctttatcggtcgtgtcaaactgcacaaaggcaaactcaatgttgca
ccggatcacccacaactgaagaaacagccgctgaaagcgaaagtcagaaaaggattggat
ccaaacacgattgcagaaaacgactgggtcgtcgcacaactcacgcgtcatccactcaaa
ggtgacaatggttttttcgttgaaattacccataaaattaccgatgccgacgacaaaatt
gccccttggtgggtcacgctggcagcaaacgatttaccgaatcaagagccggaagggatt
gaaaactgggaacagaaagatgacccggcacttacccgggttgatttaaccgatattcca
tttgtgacgattgatggtgcatcgactcaagatatggacgatgcgttgtacgccaaacgc
acggagtctggtgattttgagttaaccatcgccattgcagatccaaccgcttacatcacg
cctgatgatcagatggacaaggttgcccgtgaacgtggcttcacgatttacctgcctgga
cgcaatattcccatgctcccgagagagcttgctgacaacttatgttcactgcgggaaggt
gaaatccgcccagccctgtgctgtacagtcactgtcgctcaggatggcactctgcaagac
gatatccgctttttctcagcacacattcaatctcacgctcgcttggtttacgatcatgtt
tcagactggctggaacttggtgagtcgagtgattggacgccttccgatgacattgctcag
gtcgtccgagatctatatgccttttctcaggcgcgtagctcatggcgggagacgcacgcg
gtggtcttccccgacagaccggattatcgctttgaactgagtgaagataatgacgtaatt
gccattcatgccgatatgcgccgcagtgccaatcgtctggttgaagaggcgatggtaacg
gcaaacgtctgtgccggtaaagtgcttcagcagcaattcggaacgggtgtatttaacgtc
cacgacgggtttaaaactgaacggattgcggatgtgattacgctgattaccgagcacggc
atgagtgatcataccgatgaaacggtcaaaaccctcacagggttttccgcactacgtcgt
tggcttgctacccaagacaccagctatttggataaccgtattcggaaattccaaagctat
agtgaaatcagtaatcaaccggcaccacattttgccatggggctggatgtctatgcgaca
tggacatccccgattcgtaaatatggcgatatgatcaatcaccgcttactgaagtcttat
attatgggcaaaccaccagtgcaattaccggatgaactggttggtgaagagctggcaatt
cataggaagcatcataagattgcagaaagaagtgtcagtgactggctttatgcccggact
ttggctgaagagccacagaagcaaactcgctaccatgctgaaatctttgatattaatcgt
gccgggatgcggatcagattacttgaaaatggtgccactgcatttgtccctgccccactg
atcatggcgaacaaagaacgtatcgagtgtcatgcagatcaaggttatatctacattgat
aaagcattggtgtataaactgggtgatacacttgaagtcacactcaatgaagtgaatcaa
gaaaaccggaacatcattgccaaaccaactgccgtttttgctgaaccacctcaaagtgac
gtatcagaaacagcttga
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