Variibacter gotjawalensis: GJW-30_1_01865
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Entry
GJW-30_1_01865 CDS
T05320
Symbol
uvrD_2
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vgo
Variibacter gotjawalensis
Pathway
vgo03420
Nucleotide excision repair
vgo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vgo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GJW-30_1_01865 (uvrD_2)
03430 Mismatch repair
GJW-30_1_01865 (uvrD_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vgo03400
]
GJW-30_1_01865 (uvrD_2)
Enzymes [BR:
vgo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GJW-30_1_01865 (uvrD_2)
DNA repair and recombination proteins [BR:
vgo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GJW-30_1_01865 (uvrD_2)
MMR (mismatch excision repair)
Other MMR factors
GJW-30_1_01865 (uvrD_2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
BAT59334
UniProt:
A0A0S3PTQ7
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All DBs
Position
complement(1915445..1917907)
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AA seq
820 aa
AA seq
DB search
MADPLKLQDYAGAPAPIPGGIAARARAQAAPRYLDGLNPEQREAVETLDGPVLVLAGAGT
GKTRVLTTRIAHILSLGKARPSEILAVTFTNKAAREMKLRIGSMVGEAVEGMPWLGTFHS
IGVKILRRHAELVGLKSGFTILDTDDQIRLLKQHLSAANIDEKRWPARVLANLIDGWKNR
GLTPSQVPAGEAASFANGRGQELYAAYQERLKTLNATDFGDLLLETIRLLREQPDVLRQY
HHRFRYILVDEYQDTNVAQYMWLRLLAQRPQRNDLLADGSAAATPQRAETNLCCVGDDDQ
SIYGWRGAEVDNILRFDKDFPGAKVIRLERNYRSTGHILAAASHLIAYNEGRLGKTLRTE
DELGEKVTVSGAWDSEEEARSVGEEIEQLQRKDHSLNQIAILVRASYQMREFEDRFITLG
LPYRVIGGPRFYERAEIRDALAYLRAVNSSADDLAFERIINVPKRGLGDATVQWLHEHAR
QANMSMMDMAREVANTDELKPKPRQSLRDLMANFDRWAAQKDSLPHTELAEMILDESGYT
DMWQKDRSADAAGRLDNLKELVRSMDEFENLQGFLEHISLVMDADRGEQVDSVSIMTLHS
AKGLEFETVFLPGWEEGLFPSQRSLDEQGRAGLEEERRLAHVGLTRARRRAKIFFATNRR
IHGMWTTNIPSRFLDELPEADVEVTEQKGGFSFSGYGASRFDRQESFGSSYTTPGWQRAQ
QRGGFSGGGYSGGSGSAPSGGRWQKTEIPDLPRPRKGPRTIEGELVAKSTGTASAYSVGD
RVFHLKFGNGNVTFVEGNKLTIQFDKAGEKRVVDSFVERV
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
ttggccgatcccctgaagttgcaggactatgctggcgcgcccgccccgatcccgggcggc
atcgcggcacgcgcgcgcgcgcaggcggccccccgttatctcgatggcctcaacccggaa
cagcgcgaagccgtcgagacgctcgatgggccggtgctcgtgctggccggtgccgggacc
ggcaagacacgcgtgctgacgacacgcatcgcgcacatcctcagcctcggcaaagcccgg
ccgtccgaaatcctcgccgttaccttcacgaacaaagccgcgcgcgagatgaagctgcgc
atcggctcgatggtcggtgaagcggtcgaaggcatgccgtggctcggcacctttcactcg
atcggcgtgaagattctgcgccgccacgcagaactcgtcggcctaaaatccggtttcacg
atcctcgatacggatgatcagatccggctgctcaagcagcatctctcggccgccaacatc
gacgagaagcgttggcccgcgcgcgtgctcgccaacctcatcgacggctggaagaaccgc
ggcctcacgccatcgcaggtgccggccggtgaagctgcgagcttcgcgaacggacgcggc
caggaactttacgccgcgtatcaggagcggctgaaaacgctcaacgccaccgacttcggc
gatctcctgctggagacgatccggctgttgcgtgaacagccggacgtgctgcgccagtat
caccaccgcttccgctacatcctggtcgacgagtatcaggacacgaacgtcgcgcagtat
atgtggctgcgcctgctcgcgcagcgaccgcagcgcaacgatctgctggctgacggcagc
gcggcggcaacgccgcagcgcgccgagacaaatctctgctgcgtcggtgacgacgatcaa
tcgatctacggttggcgcggcgccgaggtcgacaacatcctgcgcttcgacaaggacttt
cccggcgcgaaggtgatccgcctcgagcgcaactatcgctcgaccggccatatccttgcg
gcggcctcgcatctcatcgcctacaacgagggccgcctcggcaagacgctgcgcaccgag
gatgagctgggcgaaaaagttaccgtctcgggcgcctgggattccgaagaggaggcgcgt
tcggtcggcgaagagatcgaacagctacagcgcaaggatcattcgctcaaccagatcgcg
atcctggtgcgcgcgtcgtatcagatgcgcgaattcgaagatcgcttcatcacgctcggc
ctgccctaccgcgttatcggcggcccgcgcttctacgagcgtgcggaaatccgcgatgcg
ctggcctatttgcgcgcggtgaattcgtccgcggacgatctcgccttcgagcgcatcatc
aacgtgccgaagcgcgggctcggcgacgccaccgtgcagtggctgcacgagcatgcgcgg
caagccaatatgtcgatgatggacatggcacgcgaagtcgcgaacacggacgagctcaag
ccgaaaccgcgccaatcgctgcgcgacctgatggcgaatttcgatcgctgggccgcacaa
aaggattcgctgccgcacacggagctcgccgagatgatcctcgacgagtccggttacacg
gatatgtggcaaaaggatcgttcggcggacgcggcaggccgcctcgacaacttgaaggaa
ctcgttcgctcgatggacgagttcgaaaacctgcagggcttcctcgagcacatttcgctg
gtgatggatgcggatcgcggcgagcaggtcgacagcgtatcgatcatgacgctgcattcg
gcgaagggcctcgaattcgagaccgtatttctgcccggctgggaagaaggtctgttcccg
agccagcgctcgctcgacgaacagggccgcgcgggtctcgaagaggaacggcgcttggcc
catgtcgggcttacacgcgcgcgtcgccgtgcgaagattttctttgcgacgaaccggcgc
attcacggcatgtggacgacgaacattccgtcacgcttccttgacgaactgccggaagcg
gacgtcgaggtcaccgaacaaaaaggtggcttctcgttctcgggatacggcgcgtcgcgc
ttcgatcgccaggagagtttcggttcgagctacacaacgcccggctggcaacgcgcgcag
cagcgcggcggattttcaggcggtggttactccggcggcagcggctcagcgccgagcggc
ggccgctggcagaagacggagatcccggatctgccgcgcccacgcaaaggtccgcgcacc
atcgagggcgaactcgtcgcgaagtcgaccggcaccgcatcggcttactcggtcggcgac
cgcgtgtttcatctcaaattcggcaacggcaatgtcaccttcgtcgaaggcaacaagctg
acgattcagttcgacaaagccggcgagaaacgcgtcgtcgatagtttcgtcgagcgggtt
tga
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