KEGG   Vibrio harveyi: AL538_21890
Entry
AL538_21890       CDS       T04380                                 
Name
(GenBank) ATP-dependent RNA helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:3.6.4.13]
Organism
vhr  Vibrio harveyi
Pathway
vhr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:vhr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AL538_21890
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vhr03019]
    AL538_21890
Enzymes [BR:vhr01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     AL538_21890
Messenger RNA biogenesis [BR:vhr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     AL538_21890
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 P-loop_SecA CMS1 AAA_22 ERCC3_RAD25_C
Other DBs
NCBI-ProteinID: AMG00343
UniProt: A0A3A1PSI5
LinkDB
Position
2:complement(1035501..1037081)
AA seq 526 aa
MGFTSLGLSAPILKAIQEKGYDTPSPIQAQAIPAVLEGKDVMAAAQTGTGKTAGFTLPIL
ERLSNGPRVRGNHIRALVLTPTRELAAQVQENVFMYSRHLPLTSAVVFGGVKINPQMLRL
RKGADVLVATPGRLMDLYNQNAVKFDQLEMLVLDEADRMLDMGFIRDIRKILELLPKQRQ
NLLFSATFSNEIRELAKGLVNNPVEISVNPANSTARTVEQCIYPADVKKKAPMLVKLIKD
GDWKQVLVFTKTKHGANRLAKFLIDQKITAAAIHGNKSQGARTKALADFKSGEVRVLVAT
DIAARGIDIPQLPQVVNFELPKVAEDYVHRIGRTGRAGEVGKAVSLVCALEASELFAIER
LIQQLLPRKELEGYAPTNVLPESKLDTRPIKPKKPKKPKKPKAEGENGQTAEKKNNGGNN
NPKRRFNSDNKNGKGENKSGKGGAGKPKGNRDGQARTNDKPSGNKPNTKQPNTNKSGANK
NGNGGKPSGNRKPNSGKPAGAKPSNGKPSGNKPSGQRRKPRPQVAK
NT seq 1581 nt   +upstreamnt  +downstreamnt
atgggttttacctcgttaggtctatctgctccaatccttaaggctattcaggaaaaaggc
tacgacaccccttcgccgattcaggctcaagcaattcctgctgttttggaagggaaagac
gtaatggcagcagcacagactggtacaggtaaaacggcgggctttacgctgccaattctt
gaacgtctgtcaaacggtccacgcgtacgcggcaaccacatccgcgcattggtgctgaca
ccaactcgtgagcttgctgcccaggtacaagaaaacgtattcatgtacagccgtcactta
cctctaacgagtgcagtggtatttggtggtgttaagatcaacccacaaatgcttcgcctg
cgtaaaggtgcagacgtcttggttgcaacaccaggtcgcctaatggacctatacaaccaa
aatgcagtgaagttcgaccaactagagatgctagtactggacgaagcagaccgcatgctt
gacatgggtttcattcgcgacattcgcaagattcttgaattgctaccgaagcaacgtcaa
aacctattgttctctgcgacattctcaaacgaaatccgtgagcttgcgaaaggtctggtc
aacaaccctgttgagatttcagttaacccagcaaactcgacagcacgcaccgtagaacaa
tgcatctacccagcagacgtgaagaagaaagcaccaatgctggtcaagctgatcaaagat
ggcgattggaaacaagtattggtatttaccaaaaccaagcatggcgcgaaccgcttagcc
aagttcctaatcgaccaaaagattacagcagctgcaattcacggcaataagagccaaggc
gcacgtactaaagctctggctgactttaaatctggcgaagttcgcgtattagtcgcaaca
gacatcgctgcgcgcggtatcgacattcctcagcttcctcaagtggttaactttgagctg
ccaaaagtagctgaagactacgttcaccgtatcggtcgtaccggtcgtgctggtgaagtg
ggtaaagcggtttctttagtatgcgcacttgaagcatccgagttgtttgcgattgaacgt
ttaattcaacaactgctgcctcgtaaagaactggaaggctacgcaccaactaacgtattg
ccagagtcgaagcttgatactcgccctatcaagccaaagaaaccgaaaaagcctaagaag
ccaaaagcagaaggtgaaaacggtcaaacagccgagaagaaaaacaacggcggtaacaac
aacccaaagcgtcgtttcaacagcgacaacaaaaatggcaagggcgaaaacaaatcaggc
aaaggcggcgctggtaagccaaaaggcaaccgtgatggtcaagctcgcacaaacgacaag
ccaagcggtaacaagccgaataccaaacagcctaatacgaacaaatcaggcgcaaataaa
aatggtaacggtggtaaaccatcaggaaaccgcaagcctaacagcggtaaacctgcgggt
gcaaaaccttcaaacggcaaaccgtcaggcaacaagccatcaggacaacgtcgcaagcca
cgtccgcaagtagcaaaataa

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