Virgibacillus sp. 6R: BKP57_03970
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Entry
BKP57_03970 CDS
T04596
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
vig
Virgibacillus sp. 6R
Brite
KEGG Orthology (KO) [BR:
vig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vig03019
]
BKP57_03970
Messenger RNA biogenesis [BR:
vig03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BKP57_03970
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GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
DUF3921
Hormone_recep
Motif
Other DBs
NCBI-ProteinID:
API94145
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All DBs
Position
complement(857119..858063)
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AA seq
314 aa
AA seq
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MKKGIRHASIGEAYEGFLLIREAIKGLTSNGKPFLTLMLRDATGEIEAKLWDATSEDETL
FVAEQIVRVAGEINQFRGKPQLKIFSIRPSQPTDDVKIDDFVEKAPVNKESLIEKLTEAI
FEMQNPNLQRIVRAFIKKYQEELLSYPAATKNHHEYASGLAHHIVSMLAIAKEIHKLYPE
INKDLLYAGIILHDMAKIKELSGVVSTTYTLKGKLLGHIPMMVEEIGTMAKEMNIEGEEI
TVLQHVVLSHHGKAEWGSPKPPLVREAEVLHLIDMLDAKLNMLNRSLEKVKPGEFTDRLF
AMDNRSFYKPLFEE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagggattaggcatgcttcgatcggggaagcttatgaaggcttcttattaata
cgtgaagcaatcaagggtttaaccagtaatggaaaaccatttttaactttaatgcttcgc
gatgcgacaggagaaatagaggcgaagctatgggacgccacttcagaggatgaaacgctc
tttgtggccgaacaaattgtccgcgttgctggtgaaatcaatcaatttcgcggaaagccg
cagcttaaaattttttcgattcgaccctcacaaccaacagatgatgtgaaaatagatgat
tttgtggaaaaagctcctgtgaataaagaaagcttaatagaaaagttgacagaagctatt
tttgaaatgcaaaatccaaacttacaacggattgtacgtgcatttattaaaaaatatcaa
gaggaactactttcctatccagctgcgacaaagaatcaccatgaatatgcgtcaggatta
gcacatcatattgtaagtatgctagcaatagccaaggaaattcacaaactttatccggag
attaataaagatttgttgtatgccgggattattctccatgatatggctaaaataaaagag
ttatccggtgttgtttctactacctacacgttaaaaggaaaactgcttggacatattcct
atgatggtggaggaaattggaacaatggcgaaagaaatgaatattgaaggggaagaaatt
actgtactgcaacatgtggtgttaagccatcatgggaaagcagaatggggaagcccaaag
ccgccgcttgttcgtgaagctgaagtgttacacttaatcgacatgctggatgctaaattg
aatatgctaaatcgttcgttagaaaaagtaaagcctggagagtttacagatagactattt
gctatggataatcgttccttctacaagccattatttgaggaatga
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