Vibrio mimicus: AL543_03585
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Entry
AL543_03585 CDS
T04381
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K03072
preprotein translocase subunit SecD
Organism
vmi
Vibrio mimicus
Pathway
vmi03060
Protein export
vmi03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
vmi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
AL543_03585 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
AL543_03585 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vmi02044
]
AL543_03585 (secD)
Secretion system [BR:
vmi02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
AL543_03585 (secD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_1st
SecD-TM1
SecD_SecF
MMPL
Sec_GG
CrgA
SIMPL
Motif
Other DBs
NCBI-ProteinID:
AMG02116
LinkDB
All DBs
Position
1:810575..812413
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AA seq
612 aa
AA seq
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MKKREQKQAAKRLINHYSAWKYVVLITTIIILTLSAIPTWYGEQPSIQLQSKDAASVLLN
VPELAHLLSKQNIQADGITQQGDKTTLVFANENQQSLARNALDSLVKEGDTITYSYVSVA
PKWLDELGFSPIKLGLDLRGGVQFLLNVDVDKAFQEQRDSMMDAVKDSLRAERLRGVSVQ
AVGNDAFDVRTQQPQALNHVRQYLQENYRGWDIRQGSDHLQVQPSQQNKSEFQTATIQQN
LKIMRDRIEELGITEALVQRQGEHAIRIELPGVQDPSQAKNVIGATASLAFYEAKSPTDA
RSFDDLILEDGNGRPVILAKRPVLSGEHIVNARAGVDNMGMSEVNISLDHAGGKIMSDFS
GKHIGKPMATVYREYKTNARGETVRSERVISVATIQSQLGSQFRITGAGSMEEAQQLALL
LRAGSLTAPVTIVEERTIGASLGEENIANGFAALALGLAMTLTFMALWYRRLGWVANVAL
LINMACLLGLIALLPGAVLTLPGIAGLVLTVGMAVDTNVLIFERIRDKLSEGRNFAQAID
TGFDSAFSTILDANITTMITAVILYSIGNGPIQGFALTLGLGLLTSMFSGVFASRALINL
VWGRDTRRDVRV
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaagagaacaaaagcaggctgcaaagcgcctgatcaaccactattctgcgtgg
aaatacgtggttttaataacaacgatcatcatcctcacattaagtgctattccaacctgg
tatggcgaacaaccatctatccaactacaaagtaaggatgccgcaagcgtactacttaat
gtgcctgagcttgcccatctgcttagcaagcaaaatatccaagccgatggaattactcag
caaggcgataaaacgaccttggtttttgccaacgaaaatcagcaatcactcgcccgaaat
gcgctagattcgctggttaaagaaggggacaccatcacctattcttatgtgtcggttgcc
ccaaagtggctagatgaacttggtttttcaccgatcaaattggggctggatttgcgtggc
ggtgtgcagtttttgcttaatgttgatgtagataaagcattccaagagcagcgagacagc
atgatggatgccgtgaaagattctctgcgtgcagagcgtttacgtggagtttctgttcag
gccgttggcaatgatgcatttgatgtgagaactcagcagccgcaagcacttaatcatgtt
cgacaatacctgcaagaaaactaccgaggttgggatatccgtcaaggctccgaccatttg
caagtgcaaccgtcacagcaaaataagtcggagtttcaaaccgctactatccagcaaaac
ttgaaaatcatgcgtgatcgaattgaggagcttggaattactgaagctctggttcagcgt
cagggcgaacacgcgattcgaattgaactgccgggagtccaagatccatctcaagcaaaa
aacgttattggtgcgactgcaagtttagcgttctatgaagccaaatccccgaccgatgca
cgcagtttcgatgacttaatcctcgaagatggcaatgggcgtccagtgattttggccaaa
cgtccagtgctgagtggtgaacatattgtcaatgcccgtgctggtgtagataacatgggc
atgtcagaagtgaatatctcacttgatcacgctggcggaaaaatcatgagtgatttttct
ggtaagcacatcgggaaacctatggcgacggtttatcgcgaatataagaccaatgcccgt
ggtgaaacggttcgaagtgaacgggtgattagcgttgcaacaattcagtctcaattgggt
agtcaattccgtatcacaggggctggctcgatggaagaggcacagcaactggcattatta
ctgcgtgcgggttcactgactgctcctgtcacaattgtcgaagaaagaaccatcggtgct
tctttaggtgaagagaacattgcgaacggttttgcggcactcgctctaggcttggcaatg
actctgacattcatggcgctttggtatcgtcgccttggctgggtcgctaatgttgcctta
ttgatcaacatggcttgtctgctcggactgattgcactattgccaggagctgtgctgacc
ttgccaggtattgctggtttggttttaacagttggtatggcggtggataccaacgtactg
atttttgagcgtattcgcgacaaactgagtgaaggtcgcaatttcgcacaggccattgat
actggttttgacagcgcattcagtaccattttggatgcgaacatcactaccatgatcacc
gccgtcattctgtattcaatcggtaatggacctattcaaggctttgcattgactttgggg
ttaggtttgctcaccagtatgtttagtggggtatttgcttcacgagcattaattaatttg
gtttggggacgtgatacacgtcgtgatgtgagggtataa
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