KEGG   Vibrio mimicus: AL543_20520
Entry
AL543_20520       CDS       T04381                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
vmi  Vibrio mimicus
Pathway
vmi03030  DNA replication
vmi03430  Mismatch repair
vmi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vmi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AL543_20520
   03430 Mismatch repair
    AL543_20520
   03440 Homologous recombination
    AL543_20520
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vmi03032]
    AL543_20520
   03400 DNA repair and recombination proteins [BR:vmi03400]
    AL543_20520
Enzymes [BR:vmi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AL543_20520
DNA replication proteins [BR:vmi03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     AL543_20520
DNA repair and recombination proteins [BR:vmi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     AL543_20520
SSDB
Motif
Pfam: RNase_T Rv2179c-like DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: AMG05199
LinkDB
Position
2:complement(3079387..3080130)
AA seq 247 aa
MNTSNNAEYQRIVVLDTETTGMNREGGPHYEGHRIIEIGAVEIINRKLTGRHFHVYLKPD
REIQLEAIEVHGITDEFLRDKPEYKDVHDEFLDFIKDAELVAHNAPFDVGFMDYEFAKLG
GSVVKTTDFCKVTDTLAMAKRIFPGKRNNLDILCERYGIDNSHRTLHGALLDAEILADVY
LLMTGGQTSLQFSAATQNSGELGAESLKRSHSERKALKVLHASADELQAHQDRLDLVAKS
GTCLWRN
NT seq 744 nt   +upstreamnt  +downstreamnt
atgaatactagcaacaatgcagaataccaacgcatagtggtgctcgataccgaaaccaca
ggtatgaaccgcgaaggcggcccacattacgaagggcatcgaattattgaaatcggtgct
gtcgaaatcatcaaccgtaaactcaccgggcgacatttccatgtctatttgaaaccggat
cgagagattcagttagaagcgattgaagttcacggtattaccgatgaatttttgcgtgat
aaaccagagtacaaagatgttcatgatgaatttctagacttcatcaaagatgctgagctg
gtcgcccataacgcgccgttcgacgtcggcttcatggattatgaatttgccaaactcggc
ggctcggtggttaaaaccacagatttttgcaaagttaccgataccttggcgatggccaaa
cggatatttcccggtaaacgcaataacttagatatcttatgtgaacgttacgggatagat
aactcacaccgaacgctccacggggcattgctcgatgcggagattctggctgatgtttat
ctgttgatgaccggcgggcagacttcactgcaattttcagccgcaacacaaaatagtggt
gaactgggcgcagaatcgctaaaacgttcgcactcagagcgaaaagcgctaaaggttttg
cacgctagcgccgatgaattacaagcacaccaagatcgtttggatttagtcgcaaaaagt
ggcacttgcctctggcgtaattag

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