KEGG   Vibrio natriegens: PN96_09290Help
Entry
PN96_09290        CDS       T04636                                 

Gene name
sdhA
Definition
(GenBank) succinate dehydrogenase
  KO
K00239  succinate dehydrogenase / fumarate reductase, flavoprotein subunit [EC:1.3.5.1 1.3.5.4]
Organism
vna  Vibrio natriegens
Pathway
vna00020  Citrate cycle (TCA cycle)
vna00190  Oxidative phosphorylation
vna00650  Butanoate metabolism
vna01100  Metabolic pathways
vna01110  Biosynthesis of secondary metabolites
vna01120  Microbial metabolism in diverse environments
vna01130  Biosynthesis of antibiotics
vna01200  Carbon metabolism
Module
vna_M00009  Citrate cycle (TCA cycle, Krebs cycle)
vna_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vna_M00149  Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:vna00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    PN96_09290 (sdhA)
   00650 Butanoate metabolism
    PN96_09290 (sdhA)
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    PN96_09290 (sdhA)
Enzymes [BR:vna01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.1  succinate dehydrogenase
     PN96_09290 (sdhA)
    1.3.5.4  fumarate reductase (quinol)
     PN96_09290 (sdhA)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: FAD_binding_2 Succ_DH_flav_C GIDA Pyr_redox_2 Thi4 HI0933_like FAD_binding_3 DAO BEX
Motif
Other DBs
NCBI-ProteinID: ALR16166
LinkDB All DBs
Position
1:complement(2044569..2046335)
Genome map
AA seq 588 aa AA seqDB search
MSIPVREFDAVVIGAGGAGMRAALQISEQGLSCALLSKVFPTRSHTVSAQGGITVALGNS
HKDDWQWHMYDTVKGSDYIGDQNAIEYMCKNGPESVIELEKMGLPFSRFDNGSIYQRPFG
GQSKEFGGEQAARTAAAADRTGHALLHTLYQQNVKHKTTIFSEWYALDLVKNQDGAIMGC
TAICMETGEICYFKSKATILATGGAGRIYASTTNAHINTGDGVGMALRAGVPMQDMEMWQ
FHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVVARSMMIEIREG
RGCDGPWGPHIKLKLDHLGKEVLESRLPGICELSRTFAHVDPVKEPIPVIPTCHYMMGGV
PTQVSGQAIKQLADGSEAEVQGLFACGEIASVSVHGANRLGGNSLLDLVVFGRATGLHLG
ETLAAQVEARPATESDIEASLARTMRWENSTGGEDPVQIRKDLQSCMQNSFSVFREGDAM
ATGLEELKVIRERLKDAHLADKSSEFNTQRIECLELDNLMETAFSTAVAANYRTESRGAH
ARFDFPDRDDENWLCHSIYNPETEAMTKRDVNMTPVHRDAFPPKVRTY
NT seq 1767 nt NT seq  +upstreamnt  +downstreamnt
gtgtctattccagttcgtgagtttgacgccgtagtaatcggcgctggtggtgcaggtatg
cgcgctgcactacaaatttcagagcaaggcctttcatgtgctttgctatctaaagtattc
ccaactcgttctcatacagtatctgcgcagggtggtatcaccgttgctctaggtaactcg
cataaggatgattggcagtggcacatgtacgataccgtaaaaggttctgactacattggt
gaccaaaacgctatcgaatacatgtgtaagaatggtcctgagtctgttatcgaactagaa
aaaatgggtcttccattttctcgttttgacaatggttctatctatcagcgtccatttggc
ggtcagtcaaaagagtttggtggtgagcaggctgcacgtacagcagcagcggcagaccgt
acaggtcacgcgcttcttcatacgctttaccaacaaaacgttaagcacaagacaaccatt
ttctctgagtggtatgcactagacttggtgaaaaaccaagatggcgcgatcatgggttgt
acagcgatttgtatggaaacaggcgaaatctgttacttcaaatcaaaagcaaccattctt
gctactggtggtgcaggtcgtatctacgcttcaacaactaacgcacacatcaacactggt
gatggtgttggtatggctctacgtgcgggcgttccgatgcaagatatggaaatgtggcag
ttccacccgacgggtatcgctggcgcaggtgttcttgtaacagaaggttgtcgtggtgaa
ggtggttatcttctgaacaaagacggcgaacgtttcatggaacgttacgctccaaacgcg
aaagaccttgctggtcgtgacgtggttgcgcgttcaatgatgatcgaaatccgtgaaggt
cgtggttgcgatggcccatggggtccacacattaaactgaaactggatcaccttggtaaa
gaagtgcttgagtcacgtctacctggtatctgtgaactgtctcgtacattcgcacacgtt
gatccagttaaagaaccaattcctgtaatcccaacctgtcactacatgatgggtggtgtt
ccaactcaggtttctggtcaagcaattaaacagcttgctgatggcagcgaagcggaagtt
caaggtctattcgcttgtggtgaaatcgcttctgtatcggttcacggtgcaaaccgtcta
ggtggtaactcactactagacttggtggtattcggccgtgcgacaggtcttcaccttggt
gaaacacttgcagcccaagttgaagctcgtcctgcaactgaatctgacatcgaagcttct
ctggcgcgtactatgcgttgggaaaacagcacaggtggcgaagatccagtacaaatccgt
aaagatctgcaaagctgcatgcaaaacagcttctcggtattccgtgaaggtgatgcgatg
gcaacaggtctggaagagcttaaagttatccgtgaacgtctaaaagatgctcacctagcg
gacaagtcttcagagttcaacactcagcgtattgagtgtctagagctagataacttgatg
gaaacagcgttctcaacagcagttgctgcgaactaccgtacggaaagccgcggtgcgcac
gctcgtttcgacttcccagatcgtgatgacgagaactggctatgccactcaatctacaac
ccggaaactgaagcgatgactaagcgtgatgttaacatgacgccagtacaccgtgacgcg
ttcccgccgaaagtacgtacatactaa

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