Vibrio nigripulchritudo: VIBNI_A2369
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Entry
VIBNI_A2369 CDS
T02871
Symbol
rluC
Name
(GenBank) Ribosomal large subunit pseudouridine synthase C
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
vni
Vibrio nigripulchritudo
Brite
KEGG Orthology (KO) [BR:
vni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vni03009
]
VIBNI_A2369 (rluC)
Enzymes [BR:
vni01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
VIBNI_A2369 (rluC)
Ribosome biogenesis [BR:
vni03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
VIBNI_A2369 (rluC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF3603
TGS
Orexin
Motif
Other DBs
NCBI-ProteinID:
CCO58438
UniProt:
U4KG70
LinkDB
All DBs
Position
1:complement(2516990..2517940)
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AA seq
316 aa
AA seq
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MNEIKTSVQFVDIDDDMAGQRIDNFLRNQLKNIPKSMIYRILRKGEVRVNKKRIKAEYKL
QAGDTVRIPPVKTSAEPEAAPVSTKLNKVAELEQHIIFEDDHMLILNKPSGIAVHGGSGL
KFGAIEALRALRPDARFLELVHRIDRDTSGILLVAKKRSALRHLQAQFREKTVQKYYFAL
VMGQWKSSCRVVNAPLLKNEVNSIVRVNPKGKPSETRFKVLEKFEQATLIQASPITGRTH
QIRVHTQYTGHPIGWDDRYGDPRFDAYTAKVGLNRLFLHAANIKFEHPGSGDKVDISAPM
GDKLEKVLTGLRKLKS
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaatcaaaacttccgtacagttcgtcgatatcgacgacgacatggctgggcaa
agaattgataactttttgcgcaatcagcttaaaaatatccctaaaagcatgatttatcgc
attttgcgtaaaggcgaagtgcgcgtgaataaaaaaagaatcaaagcagaatataagctc
caggctggtgatactgttcgaattccacctgttaaaacatcagcagaaccagaagcagcc
cctgtgagcactaagctgaacaaagttgcggagctagagcagcacatcattttcgaagat
gatcatatgctgatcctgaataagccgtctggtattgctgtgcatggtggcagcggtttg
aaatttggcgcgattgaagctcttcgggctttgagacctgatgctcgttttctggagttg
gttcaccgaattgaccgcgatacatcgggcatacttctggtggcgaagaagcgttcggcg
ctgcgtcatctacaggctcagtttagagagaaaacggttcagaagtattactttgcgcta
gtgatggggcagtggaaaagcagttgccgagtcgtgaatgctccgcttctgaaaaatgaa
gtcaacagcattgttcgggtaaacccgaaaggcaaaccttcggaaacacgtttcaaagtg
ctggaaaagtttgagcaagcaaccttgattcaggcaagcccgattacggggcgaacccac
caaattcgagtgcatacgcaatacacagggcatccgattggctgggatgacaggtatggc
gatcctcgtttcgatgcttatacagcaaaggtaggtttaaaccgtctgtttttgcatgca
gcaaacattaagtttgagcaccctgggagtggagataaggtcgatatctctgccccgatg
ggagataagctcgaaaaagtgttaactgggcttcgaaagctcaaaagctaa
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