Vibrio nigripulchritudo: VIBNI_B1599
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Entry
VIBNI_B1599 CDS
T02871
Symbol
sbcD
Name
(GenBank) Nuclease sbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
vni
Vibrio nigripulchritudo
Brite
KEGG Orthology (KO) [BR:
vni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vni03400
]
VIBNI_B1599 (sbcD)
DNA repair and recombination proteins [BR:
vni03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VIBNI_B1599 (sbcD)
Archaeal homologous recombinant proteins
VIBNI_B1599 (sbcD)
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Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
FBPase_2
SNAPC5
PRORP
Motif
Other DBs
NCBI-ProteinID:
CCO61335
UniProt:
U4KIV4
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Position
2:complement(1632600..1633823)
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AA seq
407 aa
AA seq
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MRIIHTSDWHLGQNFYTKSRKNEHQSFLNWLLQQIEQHNVDALIVAGDIFDTGSPPSYAR
EMYNQFVVQLQKSDCTLVVLGGNHDSVSVLNETKQILAYLNTHVIASSLEQSHDQVVELA
DGSGNVGALLCAIPFLRPRDIVVSQSGDSSTDKRLAIADAIKDHYASVYQAAVERRKALG
VDVPIIATGHLTALGVKQSESVRDIYIGTLEGFAADGFPPADYIALGHIHRPQIVAKQEH
IRYCGSPIPLSFDELKSNKQVLLLNFEYSNSPEITSLEIPNFQPMATVTGSLTELETVLK
KYAESEETVWLSIEVEIDDYLSDLQQRIQKMVEDLPVEVLQLKRSQSARRKALSQERNET
LDELSPFDVFTKRIAQEVFETDEELARKARLEEKFIRIVAEVEEEKK
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcattcatacctcagactggcatcttgggcaaaacttctacacaaagagcaga
aagaacgagcatcaatcctttctgaactggctcctccaacaaattgaacagcataatgtc
gatgcattgattgtcgcgggagatatcttcgatacaggatctcccccaagttacgcccga
gaaatgtataaccagtttgtggtgcaactgcaaaaatcagactgcactttggtggtattg
ggaggaaatcacgattccgtatccgtcctgaatgaaaccaagcaaattctcgcctatctc
aatactcatgtgattgccagtagcttagaacaaagccacgatcaggttgttgaattggca
gacggcagtggaaatgtgggtgcgctgctttgtgcgatcccgtttttacgtccacgtgat
atagtcgttagccagtcgggagactcctccactgacaaaaggttagcaattgcagatgca
attaaagatcattacgccagtgtttatcaggcagcagttgagaggcgaaaagctttaggt
gtcgatgttccgattatcgccacagggcatttaacggcattaggtgtaaagcagtcggaa
tctgtacgcgatatttacattggaacacttgaagggtttgcagccgacggcttcccgccc
gctgactatattgctcttgggcatattcatcgcccgcagattgtcgcaaagcaagaacac
atccgatactgtggttcccccattccactcagctttgacgaattaaagtcgaacaaacag
gtgcttctgctcaattttgaatactccaattctccagagatcacttcgttagaaatccca
aactttcagccaatggcaaccgtaactggttcgttgaccgagttggaaaccgtgctgaag
aaatatgctgagagtgaagaaacggtttggttgagtattgaggttgaaatcgacgactac
ctgtcagatttacagcaaagaattcaaaagatggtagaagatcttcctgttgaagtgctg
cagcttaaacgaagccagtccgcaagaagaaaggcgctcagtcaggaacgaaatgaaacg
ctggacgaactgagcccatttgacgtttttaccaaacgcattgcgcaagaagtatttgaa
acggatgaagaactggctcgcaaagcgcggcttgaagagaagttcattcgcattgtcgct
gaggtcgaggaggagaaaaagtga
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