Veillonella nakazawae: VEIT17_05980
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Entry
VEIT17_05980 CDS
T06972
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
vnk
Veillonella nakazawae
Pathway
vnk00550
Peptidoglycan biosynthesis
vnk01100
Metabolic pathways
vnk01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
vnk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VEIT17_05980 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VEIT17_05980 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vnk01011
]
VEIT17_05980 (mrdA)
Enzymes [BR:
vnk01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
VEIT17_05980 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
vnk01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
VEIT17_05980 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
BBU34152
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Position
688231..690153
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AA seq
640 aa
AA seq
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MLEGLYKRRKTSRFDVLFYIVAGIFIVLALRLFMLQILAGGYYQAKAEGNRLRMVPMTAA
RGVMYDRNGQILVGSRPAYTISIMPTGKALDDGEVAKLAALLKMKPEDITKKVNDHKYGY
EPIRIANDISMDVVTTIEEHRHELPGVTIDVEPLRYYPYETMASQLFGYVGEVSEEELEE
LKQQDPNTLVSGGTILGRSGLEKLYDSILRGTDGGKQVEVDATGRPVAEVDRKHTVPGAN
IHLTIDVNLQKAAEEAVKNQLDQLRAQGIPAQGAAVVAMDPNTGAILAMVSAPEFNPNWF
SKGITTAQWNQLNNDKNHPFDNKVISGEYPPGSPFKIITGTAALDLKKVTPEEMIFDSGK
HWLIDKRNAEGEALGWLNFNRALAKSDNVYFYEMGNRVGIENLDKYAAYFGIGEKTGINL
PGEASGIMASPEYKRKVYDEDWYLGETFDAAIGQSFTLVTPLQMAVLLSEVANGGIKYKP
YVVSRIDNKDGTPKEIFGPDKLGILPVPKNIMDLIREGLRDVTNEGGTAGDLFKGFPINV
AGKTGTAENAHGRDHGWFVAYAPYDKPQIVVVALVEQGSFGAGSAGPIVRDVLAAYFNVP
LNKKTNDTNTKSNKDSATVGNTSNGQKPQNAVTSGQPRKD
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
gtgcttgaaggcctctataaacgaagaaaaacgagtcgctttgatgtactcttttacatt
gtagcgggtatatttatagtgttagcattgcgtttgtttatgctacaaatcttggctggt
ggctattatcaagccaaggcggaaggcaaccgattgcgcatggtaccgatgactgcagca
cgaggcgttatgtatgatcgtaatggtcaaattcttgtaggctctcgacctgcctatact
atatctatcatgcctaccggaaaggctttggatgatggtgaagttgctaaattggcagct
ttattaaaaatgaaacctgaagatattacaaagaaggttaatgatcacaagtatggttat
gagccaatacgtattgctaatgatatttctatggatgtagtgacaaccattgaagagcat
cgtcatgaattaccaggggtaaccattgatgttgagccacttcgatactatccatatgaa
acgatggcttctcaattatttggttatgttggtgaagtgagtgaagaggaattagaagag
ctaaaacagcaagaccctaatacactggtaagtggcggtactattttaggtcgttctggt
ctcgaaaaattatatgattctatcttgcgtggtaccgatggtggtaaacaagttgaggta
gatgctacaggtcgtcctgtggctgaagtagatagaaaacatacagtgccaggtgctaat
attcatctaaccatcgatgtgaatttacaaaaggctgcagaagaagctgttaaaaaccag
ctcgatcaattgcgtgcgcaaggtattccagcacaaggggcagcagtggtggccatggac
cctaatacaggggctattttagctatggtcagtgcgcctgaatttaatccaaactggttt
tctaaagggattacaactgctcaatggaatcagctgaataatgataaaaatcatccattt
gataataaggttatttctggtgaatatccaccaggatcaccatttaagattattaccggt
acagctgcgttagatcttaaaaaggttactcctgaagagatgatctttgacagtggtaag
cactggttgatcgataagcgaaatgcagaaggtgaagccttaggatggcttaactttaat
agagcgcttgctaagtcagataacgtttacttctatgaaatgggtaatcgcgttggtata
gaaaatctcgataaatatgctgcttattttggtattggcgaaaagactggtattaattta
ccaggtgaggcgtctggcattatggcaagccctgagtataaacgaaaagtatatgatgaa
gattggtacttaggtgaaactttcgatgctgctattggtcaatcttttaccttagttacg
ccattgcaaatggctgttttgctcagcgaagtagctaatggtggcattaaatataaacct
tatgtggtaagccgtattgataataaagatggcactccgaaagagattttcggtcctgat
aaattaggtattctaccagttccaaaaaatattatggaccttattcgagaaggtttgcgt
gatgttacaaacgaaggtggtacagcaggggacttatttaaaggcttcccaattaatgta
gctggtaagactggtactgcggaaaatgcacatggccgggatcatggctggtttgtagcc
tatgcaccatatgacaagccacaaattgttgtggttgcacttgttgaacaaggtagcttt
ggtgcgggctctgcaggtccaatcgtacgagatgtgttagccgcatatttcaatgtacca
ttaaataaaaaaacgaatgatacaaatactaaaagtaataaagatagtgcaactgtaggg
aatacgtctaatgggcagaaacctcagaatgcagtaacaagtgggcaaccaagaaaggat
tag
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