Vibrio neocaledonicus: D3H41_18455
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Entry
D3H41_18455 CDS
T06228
Name
(GenBank) SgrR family transcriptional regulator
KO
K11925
SgrR family transcriptional regulator
Organism
vnl
Vibrio neocaledonicus
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vnl03000
]
D3H41_18455
Transcription factors [BR:
vnl03000
]
Prokaryotic type
Helix-turn-helix
Other families
D3H41_18455
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Gene cluster
GFIT
Motif
Pfam:
SgrR_N
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QCO88009
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Position
2:complement(346048..347757)
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AA seq
569 aa
AA seq
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MSSPRLRVQFETLFEKFSGHDTDVQLEDITEALFCTRRNARIVLNKLEEEGWIEWHPAAG
RGKLSKLVFKRNRSDVSENLARRYLDEGKIGQALDALDNDAARLTQVIQGYLGLQHRQGE
QVVRLPYYRPLSMLNPQKPMRRSEQHIARQIFSGLTRLDENEQLQPDLAHTWEAISDTHW
RFYLRRGVRFHNGEPLTTSCVLESVLALNSLNLFSHIKRVSSPQEWTVDIELIRPDRYLP
LALSESQAKILLPSALRSESFDRQPIGTGPFQVKMNDDKRLILTAFDGYFGFRPLLDQVE
VWVIDEAYSSMVYPSLSKPKMDKQGSSDEVELDPGCTFLLLNKNTGIAKDPRWAEFLSQT
LNSHQIYAHVPQDKVMELGVLQAFGLKPGWIDLRPAEAGSVPQANKVISVAYQKKHPMFP
VVAKAIKTLLKPHGIEVEFIRYDSQPPAPEEVDIWVKAMGIATNRNDALAGWLLDYSDIE
KFSSGYDFSEWAKLVDQWRAGMHTDFPARELGRQLVKSCQVIPMFHCWLGVNKDHSGALQ
NAKCNALGWFDFNNVWVKPDIESNHGETE
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgagtagccctcgtttacgtgttcagttcgaaacactgtttgaaaaattttccggtcac
gatacggacgttcagctcgaagacatcaccgaagcgttgttttgtacacgtcgtaatgct
cgtattgttctaaataaacttgaagaagagggctggattgagtggcatccggcagcgggt
cgaggaaaactttcgaaactcgtttttaaacgtaatcgaagcgacgtcagcgaaaacctc
gccaggcgttatctcgatgaagggaaaatcggtcaggctctagatgcgcttgataacgat
gcggcacgattaacgcaggttatccaaggttatttagggcttcagcatcgacagggcgag
caggtcgtgcgtttgccttattatcgaccattgtcgatgttaaacccgcagaaaccgatg
cggcgttctgaacaacacatcgccagacaaatttttagcggactcactcgccttgatgaa
aatgaacaacttcaaccagatttagcccacacgtgggaagcaatttctgatacacattgg
cgcttttatcttcgtcgtggagtacgctttcataacggtgaaccgttaacaaccagttgt
gttcttgaaagtgtgcttgcgttaaatagcttgaacttgttttctcacataaagcgggtg
tcttcgccacaagagtggaccgttgatattgagctcatccgtcctgatcgctacctgcct
ctggctctgagtgagtcgcaagcaaaaattttgctaccgagtgctttgcgttctgaaagc
ttcgatagacaaccgatagggactgggccgttccaagttaaaatgaatgatgataagcgt
cttattttgactgcttttgatggctactttggttttcgccctttacttgaccaagtggag
gtgtgggtaatcgatgaagcctattcttcaatggtttatccaagcctgtcaaagccgaag
atggataaacaaggttcatccgatgaagtagagctggaccctggatgtacattcctatta
ctaaacaaaaacaccgggattgcaaaagatccacgttgggcagagttcctctcgcaaacc
ctcaacagtcaccagatttacgcgcatgtcccacaagataaagtgatggaactgggagta
ttgcaagcgtttggccttaagcccggttggattgatcttaggccagcagaagcgggcagc
gtaccacaggctaataaggtaatttccgtagcgtatcagaaaaagcatccgatgtttcca
gtagttgccaaggccatcaagacactcttaaaaccgcacggtatagaggttgagtttatt
cgttatgattctcaaccgcccgcaccggaggaagtggatatctgggtgaaagctatgggc
attgcaacgaaccgaaatgacgcgttggcgggctggctcctggattacagtgatattgag
aagttcagttcaggttacgattttagtgaatgggctaaacttgtcgatcaatggcgtgcc
ggcatgcacacagactttcctgcgcgtgagctaggacgacagttagtaaaaagctgtcag
gtgattcctatgtttcactgctggctaggtgtgaataaagaccacagcggtgcgttacaa
aatgcaaagtgtaatgccttaggttggtttgattttaataatgtatgggtcaaaccggat
atagaaagtaaccatggcgaaaccgaataa
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