KEGG   Candidatus Vesicomyosocius okutanii: COSY_0376
Entry
COSY_0376         CDS       T00530                                 
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase omega subunit
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
vok  Candidatus Vesicomyosocius okutanii
Pathway
vok03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:vok00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    COSY_0376 (rpoZ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vok03021]
    COSY_0376 (rpoZ)
   03400 DNA repair and recombination proteins [BR:vok03400]
    COSY_0376 (rpoZ)
Enzymes [BR:vok01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     COSY_0376 (rpoZ)
Transcription machinery [BR:vok03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     COSY_0376 (rpoZ)
DNA repair and recombination proteins [BR:vok03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      COSY_0376 (rpoZ)
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: BAF61498
UniProt: A5CX12
LinkDB
Position
383251..383583
AA seq 110 aa
MARVTVEDCLDHVENRFELVLIAAKRAHQLSSGGYKPLLNAGKDKPTVVALREIEAGLID
SSILSEIYVIDEQLSAQQKVLDSVKMSEIKDELSVTAVDKVIDEITEIEE
NT seq 333 nt   +upstreamnt  +downstreamnt
atggcaagagtaacagtcgaagattgtttagaccatgtagaaaatcgcttcgagttggta
ttgatagcagcaaagcgtgcacatcaattaagttctggaggttataaaccattattaaat
gcgggtaaagataagccaacggtagtagcgttaagagaaattgaggcaggattgattgac
tcttcaattttaagtgaaatttatgtaatagatgagcaattatcagcacaacaaaaagta
ttggatagtgtaaaaatgtctgaaattaaagatgaattatcagtaacagctgttgataaa
gttattgacgagataacagaaattgaagagtag

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