KEGG   Vibrio owensii: A9237_00660Help
Entry
A9237_00660       CDS       T04844                                 

Definition
(GenBank) DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
vow  Vibrio owensii
Pathway
vow03030  DNA replication
vow03410  Base excision repair
vow03420  Nucleotide excision repair
vow03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:vow00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    A9237_00660
   03410 Base excision repair
    A9237_00660
   03420 Nucleotide excision repair
    A9237_00660
   03430 Mismatch repair
    A9237_00660
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vow03032]
    A9237_00660
   03400 DNA repair and recombination proteins [BR:vow03400]
    A9237_00660
Enzymes [BR:vow01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     A9237_00660
    6.5.1.6  DNA ligase (ATP or NAD+)
     A9237_00660
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     A9237_00660
DNA replication proteins [BR:vow03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    A9237_00660
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     A9237_00660
DNA repair and recombination proteins [BR:vow03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     A9237_00660
   NER (nucleotide excision repair)
    Other NER factors
     A9237_00660
   MMR (mismatch exicision repair)
    Other MMR factors
     A9237_00660
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_OB_2 DNA_ligase_A_M RNA_ligase mRNA_cap_enzyme ParA
Motif
Other DBs
NCBI-ProteinID: AQW56698
LinkDB All DBs
Position
1:complement(151605..152447)
Genome map
AA seq 280 aa AA seqDB search
MPLRMTLIALAVISSAQPQADPNLLPPVSLADSYQDGIDVSQYWYSEKLDGIRAYWTGQH
LVTRNGNRIYAPDWFIRVLPDYPLDGELWAGRGNFHLVQQTVLDRTPVDSAWQRIDFMLF
DMPYSAGDYRKRYYNIQDLVFAIDAPHIKYVEHRAIQDEKHLFEQLDQISQSDGEGVMLR
KVSSRYQAGRGSDLLKLKRFEDAEALVVGYKPGTGRLLGMMGALLVRLSNGTEFYIGSGF
TDDVRKSPPRIGSTVTFRFNGYTHNGKPQFARFLRERVPQ
NT seq 843 nt NT seq  +upstreamnt  +downstreamnt
atgccattaagaatgacattgattgccctcgctgtaatatcttccgcccagcctcaagct
gatcccaacttactaccacctgtttcacttgctgattcctatcaagacggaatagacgta
tcccagtactggtatagcgaaaagctcgatggcattcgggcgtattggacgggacaacat
ctagtgacacgaaatgggaatcgcatttacgcgccagattggtttatccgagtgttacct
gattacccattagatggcgaattgtgggcagggcgaggtaacttccatcttgttcagcag
acggttttagacagaacgccggtagacagtgcatggcaaagaatcgattttatgctgttt
gatatgccgtattcggcgggtgattatagaaaacgttactacaacattcaggacttggtg
tttgcgattgacgcgcctcatattaagtacgttgagcatcgtgcaattcaagatgagaaa
catttgttcgaacaactcgaccaaatttcgcaatctgacggtgaaggtgtcatgttgaga
aaggtatcaagccgttatcaggcaggaagaggcagtgatttactcaagctcaaacgcttt
gaagatgcagaagccttagtggtcggttacaaaccagggacgggacgtttactgggaatg
atgggagcgctgctggtgcgtttgagcaatggcacagagttttacattggcagtggcttt
accgatgatgtaagaaagtctccgccacgaatcggctcaacagtcacgtttcgctttaac
ggttatacccataatggaaaaccacaatttgcacgattcctaagagagcgagttcctcaa
taa

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