Vibrio parahaemolyticus RIMD 2210633: VP0040
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Entry
VP0040 CDS
T00120
Name
(GenBank) transcriptional regulator, TetR family
KO
K18136
TetR/AcrR family transcriptional regulator, multidrug resistance operon repressor
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VP0040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpa03000
]
VP0040
Transcription factors [BR:
vpa03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
VP0040
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
TetR_C_10
HTH_psq
HTH_Tnp_1_2
TetR_C_24
HTH_Tnp_ISL3
HTH_7
HTH_3
DUF4760
TnsD
HTH_26
HTH_38
LacI
Motif
Other DBs
NCBI-ProteinID:
BAC58303
UniProt:
Q87TM9
Structure
PDB
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All DBs
Position
1:complement(46404..46985)
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AA seq
193 aa
AA seq
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MTDNPAVDKRDQILAAAEQLIAESGFQGLSMQKLANEAGVAAGTIYRYFSDKEHLLEEVR
LNVAKRIASAVQAGVNDDMPLKECYRTMWLNIWNLAGSNLNAISNRVQYDSLPCTTRNKT
WELERKMFAQVDRLFNQGKEEGVFKPLDNEVLSGLSFEASVALARKHALGFYQLDDDALE
AAIEASWDAIIKH
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgacggacaaccctgctgtagataaacgcgatcaaatacttgccgctgcggagcagtta
attgcagagtctggctttcaagggctttctatgcaaaagctggccaacgaagcgggtgtc
gccgccgggacgatttatcgctatttctcagacaaagaacacctattggaagaagtgcgt
cttaacgtagccaaacgcattgcctctgcagtgcaagcgggcgttaatgacgacatgcca
ttgaaggaatgctaccgaaccatgtggctcaacatctggaatttggcgggttccaactta
aacgccatcagtaatcgagttcaatatgattcgttaccttgcacaacaagaaacaagacg
tgggaacttgagcgaaaaatgtttgcccaagtagatcgccttttcaaccagggcaaagaa
gaaggggtttttaagcctctcgataacgaagttctctctggattaagctttgaagcaagc
gtcgcgcttgcgagaaaacatgctttgggattttatcaattggacgacgatgcgctggaa
gcagccattgaagccagttgggatgcaattatcaaacactaa
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