Vibrio parahaemolyticus RIMD 2210633: VP1011
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Entry
VP1011 CDS
T00120
Name
(GenBank) isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa00020
Citrate cycle (TCA cycle)
vpa00480
Glutathione metabolism
vpa01100
Metabolic pathways
vpa01110
Biosynthesis of secondary metabolites
vpa01120
Microbial metabolism in diverse environments
vpa01200
Carbon metabolism
vpa01210
2-Oxocarboxylic acid metabolism
vpa01230
Biosynthesis of amino acids
Module
vpa_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vpa_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
VP1011
09106 Metabolism of other amino acids
00480 Glutathione metabolism
VP1011
Enzymes [BR:
vpa01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
VP1011
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Gene cluster
GFIT
Motif
Pfam:
IDH
Motif
Other DBs
NCBI-ProteinID:
BAC59274
UniProt:
Q87QY7
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All DBs
Position
1:1058272..1060497
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AA seq
741 aa
AA seq
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MPTEKPTIIYTITDEAPALATYSLLPIIQSFTASSGINVDTRDISLAGRIIANFPEHLKE
EQRIGDALTELGELAQTPEANIIKLPNISASIPQLKAAIKELQAKGYDLPNYPEEPSTYE
EKAIKSAYDKIKGSAVNPVLREGNSDRRAPLSVKNYAKKNPHSMGAWSSDSKSHVSSMAG
DDFFGSEKSTTISGATEVKIEFVGADGSVKELKSAFPLLDKEVIDSSVLKKKALVEFFEK
EIADAKEQDVLLSLHMKATMMKVSDPVIFGHAVKVYYKDVFAKYGKLFEELGVDVNNGLG
DVYSKIESLPAAQKEEIEAAIQAVYQTQPELAMVDSDRGITNLHVPSDIIVDASMPAMLR
SSGQMWGPDGKQKDTKAMIPDRCYAGIYQAVIDFCKEHGAFDPTTMGSVPNVGLMAQKAE
EYGSHDKTFILDAAGTVRVVDASGAALLEQAVEEGDIFRMCQVKDAPIQDWVKLAVTRAR
ATGVPAVFWLDENRAHDAELIKKVNAYLPDHDTTGLEIKILAPVEACKYSLERMKAGLDT
ISVTGNVLRDYLTDLFPILELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQVEKENH
LRWDSLGEFLALAASLEHLSSVTGNAKAQALADTLDKATGEFLDKNKSPSRKVGELDNRG
SHFYLALYWAKALAEQTVDADLATEFAPIAKSLAEQEEKIVAELNSAQGVKGELGGYYLL
DDALVSKLMRPSETFNAIIDK
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgcctacagaaaaacctaccattatctacaccatcactgatgaagcaccggcgctagca
acttattcattactaccaatcattcaatcgtttactgcatcgtctggcatcaacgtagat
actcgtgatatttcactagcgggtcgaattatcgctaacttcccagagcacttaaaagaa
gagcaacgcattggcgacgcgttaactgagctgggcgaactcgcacaaacaccagaagct
aatatcatcaagttgccaaacatttcggcttctattcctcagctaaaagccgcaatcaaa
gagcttcaagctaaaggttacgacctaccaaactacccagaagagccaagtacttacgaa
gaaaaagcgattaaatcggcttacgataagattaagggcagtgcggtaaacccagtactt
cgtgaaggcaactctgaccgtcgtgcgccactttctgttaagaactatgcaaagaaaaac
ccacactcaatgggcgcatggtcatcagactctaaatcccatgtatcaagcatggcgggt
gacgatttctttggtagcgagaaatcaacaaccatttctggcgcaacagaagtaaaaatc
gagtttgttggcgcagatggctctgtaaaagagctaaaatctgctttcccactgttagac
aaagaagttattgatagctctgtactgaagaaaaaagcattggttgagttcttcgaaaaa
gaaatcgcagatgcgaaagagcaagacgtactgctttctctacacatgaaagcgacgatg
atgaaggtttctgacccggttatcttcggtcacgctgtaaaagtgtactacaaagacgtt
tttgctaaatacggtaagttattcgaagagcttggcgttgatgtaaataatggtcttggt
gatgtttactcgaaaatcgagtcactaccagcagcacagaaagaagagattgaagcggca
attcaggcggtttaccaaactcagcctgaacttgcgatggttgattcggatcgtggcatc
acgaacctgcatgtcccaagcgacatcattgtcgatgcatctatgccagcaatgttgcgt
tcttctggccaaatgtggggtcctgacggcaagcaaaaagatactaaagcgatgatccca
gatcgctgctatgcaggtatctaccaagcagttatcgatttctgtaaagagcacggcgca
tttgacccgacaacaatgggcagcgtaccaaacgtgggtttgatggctcaaaaagcagaa
gagtacggttctcacgataagacgtttatcctagatgccgcaggtacagtacgtgttgtt
gatgcttctggcgcagcgctgcttgaacaggcggtagaagagggtgacatcttccgtatg
tgtcaggtaaaagacgcgccaattcaagattgggtgaaacttgcagtaactcgcgcacgt
gcgacaggcgttccagctgtattttggctagatgaaaaccgcgcacacgatgcagagctt
attaaaaaggtcaatgcatacctgccagatcacgatacgacaggcctagaaattaagatt
cttgctccagtagaagcatgtaaatactcattagagcgaatgaaagctggtctagatact
atttctgtaacgggtaacgtacttcgtgactacctaacagacttgttcccaattttggaa
ctgggtacatccgctaaaatgctctcaatcgttccgttgatgaacggcggtggcctgttt
gaaaccggtgctggtggttctgctccaaaacacgttcaacaagttgagaaagaaaaccac
cttcgttgggattctctaggcgagttcttagcattagctgcttctctagagcatttaagc
tcagtaactggcaatgctaaagcgcaagctctagccgatacactagacaaagcaacgggt
gaattcctagacaaaaataaatcgccatcacgtaaagtaggtgagttggataaccgtggt
agtcacttctacttagcactgtactgggcgaaagcattggcagagcaaacggtggatgca
gacttagccactgaatttgcacctattgcaaaatctcttgctgaacaagaagagaagatt
gttgcagaacttaatagtgctcaaggcgtgaaaggtgagctaggtggatactacttacta
gacgatgctttggtttctaaattgatgcgtccaagcgaaacgtttaacgcaatcatcgac
aagtaa
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