Vibrio parahaemolyticus RIMD 2210633: VP2048
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Entry
VP2048 CDS
T00120
Name
(GenBank) DNA polymerase III, delta prime subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa03030
DNA replication
vpa03430
Mismatch repair
vpa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VP2048
03430 Mismatch repair
VP2048
03440 Homologous recombination
VP2048
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vpa03032
]
VP2048
03400 DNA repair and recombination proteins [BR:
vpa03400
]
VP2048
Enzymes [BR:
vpa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VP2048
DNA replication proteins [BR:
vpa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VP2048
DNA repair and recombination proteins [BR:
vpa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VP2048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
Motif
Other DBs
NCBI-ProteinID:
BAC60311
UniProt:
Q87N27
LinkDB
All DBs
Position
1:complement(2149126..2150088)
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AA seq
320 aa
AA seq
DB search
MFNDFPWLKPAWENLKSGLDSDRIPGALLLQSDKGLAVEMLVEFFSHALLCQNYSSEACG
FCHSCQLTKSQSHPDLHWIRPEKEGKAITVDQIRACNRLAHESSQLNGYRLFVIEPADAM
NESASNALLKTLEEPGEKCLFLLVTHNQERLLPTIRSRCQHWVVTPPSTDQAMQWIGEQG
LSQVPAFALKLNMGSPLKTLESLKNGELEEYSAFERCLVETLLSPTSDVSKCASLMAKNP
DQALDWAWLLLTDAQKAQFGVVDEGILPGAAKFQPHHYDGLYASTKKLMELKAQMQTFPG
LNLELLSMNWLIESREALCS
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatgattttccttggctaaagccagcatgggagaacctcaaatctgggttggat
tcagatcgaattcctggagctttattgctgcaaagtgataaaggcttggcagtagaaatg
cttgttgagttttttagtcatgcacttctttgtcaaaactacagcagtgaagcttgcggt
ttttgccatagctgtcaactgacgaaatctcaaagccatccagatttgcactggattagg
ccagagaaagaaggcaaggcgattacggttgaccaaattcgcgcttgcaaccgtctagct
catgaatcttctcagctgaatggttaccgtttgtttgtgattgagccagccgatgcgatg
aatgaatccgcttctaatgcgctattaaaaacgctggaagaaccgggcgaaaaatgtttg
tttttgctggtcactcataatcaagaaagattgctaccgacgattcgtagccgatgccag
cattgggttgtgacgccgccttcaaccgatcaagctatgcagtggataggggagcaaggc
ttgtctcaagtaccggctttcgcactgaaactgaatatgggttctccattaaaaacgctt
gaatcgttgaaaaatggtgagctagaggagtattcggctttcgaacgttgtttggttgaa
acactgttatctccgacgtctgatgtatccaaatgtgcatccttaatggcaaaaaatcca
gaccaagcgctggattgggcatggttgttattgacggatgctcagaaggcgcagtttggt
gttgtagacgaaggcatactgcctggtgccgcgaaatttcagccccatcattacgatggg
ttgtatgcatcaacaaagaaactcatggagctcaaagcgcaaatgcaaacctttccgggt
ttgaaccttgagctactatcaatgaactggttaattgaatcacgagaggcattatgttcg
tag
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