Vibrio parahaemolyticus RIMD 2210633: VPA0004
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Entry
VPA0004 CDS
T00120
Name
(GenBank) peptide ABC transporter, ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VPA0004
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpa02000
]
VPA0004
Transporters [BR:
vpa02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
VPA0004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
oligo_HPY
G-alpha
SMC_N
NB-ARC
AAA
AAA_25
AAA_29
AAA_22
ABC_ATPase
PRK
RsgA_GTPase
tRNA_lig_kinase
AAA_16
Motif
Other DBs
NCBI-ProteinID:
BAC61347
UniProt:
Q87K94
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All DBs
Position
2:complement(4805..5698)
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AA seq
297 aa
AA seq
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MIIIIFCIGWVFLMSEINLSHAFHSEPVIQIRELCVDYITDNGDFNAVKSVSFDIGKGEV
FGLAGESGCGKSTIAFSINRLHKPPAFISGGQILFQGKDILRLSDKELSALRWSEIAMVF
QSAMNSLNPVLTIQEQFADVLRHHQGLSNEQAKDRAEKLLDLVNIPRDRLGEYPHQFSGG
MRQRLVIAIALSLNPKLIIMDEPTTALDVVVQREILQQIYQLREEFGFSVLFITHDLALM
SQLCDRIAIMRHGEIVEVNHAYEIRNHPQHPYTQKLWASFPNIHDVHKQPEQQGAPA
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgataataattatcttttgtattggttgggtatttttaatgagtgagattaatttaagt
cacgcctttcacagcgagccggtcatccagatccgagagttgtgcgtggactacatcacc
gacaatggtgactttaatgcggtgaaatcggtcagctttgatattggaaaaggcgaagta
ttcggccttgctggggagtctggatgcggaaagagtaccatcgctttttcgatcaatcgt
ctgcacaagccgcccgcgtttatctctggtggacaaattctgttccaaggtaaggacatc
ttacgtttgtccgataaggagctaagcgcgctgcgttggagcgaaatcgccatggtattc
caaagtgccatgaactcgctaaatccagtactgaccattcaagagcagtttgcagacgtc
ctacgtcatcatcaaggactcagcaacgaacaagccaaagatcgcgccgaaaaactgctc
gatttggtgaacatccctcgagatcgactgggtgaatatccgcaccagttctctggggga
atgcgccaaaggctggttattgccatcgcgctgtctttaaaccctaagctcatcattatg
gatgaaccaacgacagcgcttgatgtggtggtgcagcgagagattctgcaacaaatttat
cagctgagagaagaatttggtttctcagttcttttcatcacccacgatttagccttgatg
agccaattgtgcgaccgcatcgccatcatgcgccatggtgagatcgtagaagtcaatcac
gcttacgagatccgcaatcacccacaacacccttacacgcaaaaattgtgggcctcgttc
cccaatattcacgatgttcacaagcagccagagcaacaaggagcaccagcatga
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