Vibrio parahaemolyticus RIMD 2210633: VPA0792
Help
Entry
VPA0792 CDS
T00120
Name
(GenBank) putative ATP-binding/permease fusion ABC transporter
KO
K06147
ATP-binding cassette, subfamily B, bacterial
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpa02000
]
VPA0792
Transporters [BR:
vpa02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
VPA0792
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
AAA_22
AAA_21
ABC_ATPase
AAA_30
AAA_16
RsgA_GTPase
MPC
TsaE
Rad17
AAA_29
AAA_25
AAA_5
nSTAND3
AAA_18
AAA_14
AAA_23
Motif
Other DBs
NCBI-ProteinID:
BAC62135
UniProt:
Q87I14
LinkDB
All DBs
Position
2:complement(818952..820712)
Genome browser
AA seq
586 aa
AA seq
DB search
MSRKNNKNLSILLKLNTFIAPYKWRVAAALVALVATASLTLSVGYGVRILIDQGFAQQSL
QELTNAIQFIVGVTLCIAIGTFFRFYLVSSVGERVSADIRLAVFNHVITLHPSYFETNSS
GDIMSRLTTDTTLLQSIIGSSFSMAMRSALMCFGAIIMLFATNVKLTLIVLASVPLVLVP
ILFYGRRVRALSRQSQDSMSDVGSYAGEAIEHIKTVQSFSSEPYERAAFAVEVEKAYEVG
RQRVKQRAILISGVIVIVFSAIAGMLWIGGSDVIHGKMSAGDLAAFVFYAIMVASSTATI
SEVMGELQRAAGATERLIEILQVESDIKAPSNHLPVRSDMSAEVSFKSVNFNYPSRPNQP
AVKGLNLTAEQGKVLALAGPSGAGKTTLFELLQRFYDPQQGQVLFGGEDIRQFDPNELRR
QMALVPQQPALFSHDVFHNIRYGNPEATDEQVIEAAKKAHAHEFIEKLPEGYYSFLGERG
VRLSGGQKQRIAIARAILKDPKILLLDEATSALDSESEHHVQQALEALMKGRTTLIIAHR
LSTIQHADKIAVLDNGELVDVGNHQSLMQSCELYQRLVALQFKHLE
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgagccgaaaaaataacaaaaatctcagcattcttcttaaactcaacacctttattgcg
ccttataaatggcgggttgcagcagccttggttgcacttgtcgcaacagcaagtttaacg
ttatccgttggttatggagtacgtattcttatcgaccaagggtttgcacagcaatcattg
caagagcttaccaatgcgattcagtttattgttggtgtcacactgtgtattgccattggg
acgttctttcgcttctaccttgtatcttcggtgggtgagcgtgtcagtgcggatattcgc
cttgcggtgtttaaccatgtgattaccttgcatccgagctattttgagaccaacagtagc
ggcgatattatgtcgcgcctgactaccgataccacgttgctgcaaagcattattggttca
tcgttctcgatggcgatgcgtagcgctttgatgtgttttggagccatcataatgttgttt
gccaccaacgtgaagctcacgctgattgtgcttgcttctgtgcctttggttttggttccg
attttgttttatggacgacgcgtgcgtgcgctctctcgccaaagtcaggactcaatgtcc
gatgtcggcagctacgcaggtgaagcgatagaacatattaaaaccgtgcaaagttttagc
tcagagccgtacgaacgagcggctttcgctgtcgaggtggaaaaagcgtatgaagtgggc
agacagagagtaaaacaacgcgcgatcctgatatctggcgttattgtaattgtattcagc
gcaattgcaggcatgctttggattggcggcagcgatgtgattcacggaaagatgtctgcg
ggagacctagcagcgtttgtgttttatgccattatggttgcctcatcgactgcaaccatt
tctgaagtcatgggtgaactgcaaagggccgctggcgctaccgagcgactgattgagatc
cttcaagtagaaagcgatattaaagcaccaagcaaccatttgcctgtccgttcagacatg
tctgctgaagttagctttaagtcggtgaatttcaactacccttctcgcccaaatcaacct
gctgtcaaaggattaaatttaaccgctgaacaaggcaaagtattggcgttggctggccct
tctggtgcaggtaaaacaacgctattcgaactgctgcaacgcttttatgacccacaacag
gggcaagtgttgtttggtggcgaagatattcgacagttcgacccaaacgagcttcgacgc
caaatggcactcgtacctcaacaaccagcgctgtttagccatgatgtgtttcacaatatt
cgttacggcaatccagaagccacagatgaacaagtcatcgaagccgccaaaaaagcccat
gcccatgagtttattgagaagcttcccgaaggctattacagctttttaggtgagcgcggc
gttaggctatcaggcggtcaaaagcagcgcattgcgattgctcgcgcgattctaaaagat
ccaaaaatcttactgctggatgaagccaccagcgcccttgatagtgaaagtgaacatcac
gttcagcaagcacttgaagcactaatgaaaggacgcacaacgctgatcattgctcatcgc
ctttcgactatccaacatgcggataaaatcgcggtgctggacaatggtgagttagtcgat
gttggtaaccaccaatcattaatgcaaagctgtgagctgtatcagcgacttgtggcgttg
caatttaaacacttagagtag
DBGET
integrated database retrieval system
