Vibrio parahaemolyticus BB22OP: VPBB_0247
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Entry
VPBB_0247 CDS
T02409
Name
(GenBank) Nucleoside-diphosphate sugar epimerase dehydratase
KO
K24300
UDP-N-acetylglucosamine 4,6-dehydratase [EC:
4.2.1.135
]
Organism
vpb
Vibrio parahaemolyticus BB22OP
Pathway
vpb00541
O-Antigen nucleotide sugar biosynthesis
vpb00552
Teichoic acid biosynthesis
vpb01100
Metabolic pathways
vpb01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
vpb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
VPBB_0247
00552 Teichoic acid biosynthesis
VPBB_0247
Enzymes [BR:
vpb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.135 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining)
VPBB_0247
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Motif
Pfam:
Polysacc_synt_2
Epimerase
CoA_binding_3
RmlD_sub_bind
GDP_Man_Dehyd
3Beta_HSD
CoA_binding
adh_short
KR
PglD_N
NAD_binding_4
DUF2070
Motif
Other DBs
NCBI-ProteinID:
AGB08769
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Position
1:266912..268810
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AA seq
632 aa
AA seq
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MVSVLIDVMLIFMAFHLAIFVRSGDTNYFTYPVVWGIQIGVTIVTIAVFARLGLYRAVLR
YLTFQALFVVTAGAIISATLVAALSFYMSDPFPRTVPVIYAAFLALFCGGPRVIVRSLIA
QSYSTQSKEVLIYGAGSGGRQLAMALRSSGDYRVRAFIDGDSTLCNTMILGLPVIAIEDA
MPIINKYDVSQVLLAVPSAKRSRRKVILDELAKLPVEVLTVPDMTDIVSGKAKIDELKDV
AIEDLLGRDPVAPQQVLLEANIKDKVVMVTGAGGSIGSELCRQIVEQSPKSIILFELSEF
GLYQIDRELNQLKVEKGLTCDIVPLLGSVQRQHRLETTMSSFKVQTVYHAAAYKHVPLVE
FNVIEGVRNNIYGTYYTACAAIKAGVESFVLISTDKAVRPTNVMGTTKRMAELGLQALAD
QENAKPNGTRFCMVRFGNVLGSSGSVIPVFKKQIASGGPVTVTHPEITRFFMTIPEAAQL
VIQAGAMGKGGDVFVLDMGESVKITDLACNLIQLSGLEVKSEANPHGDIEIQFSGLRPGE
KLYEELLIGDNVKQTAHERIMTAHEVHLPLQEYELLLNDLDFACHSMDHENIRTLLLNAP
TGFNPTDGIGDLVWSHNQLELNLVDTELVVNE
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggtcagtgttctgattgacgttatgttgatctttatggcttttcatttggcaatcttt
gttcgttctggagataccaattacttcacgtatccagtagtctggggtattcaaataggc
gtgacaattgtcacaattgctgtttttgctcgactggggctttatagagcagttctccgc
tacttaacttttcaagctctgtttgtcgtgactgctggtgccattatatctgcaacgctt
gttgcagctttaagtttctacatgagtgacccatttcctagaacagtacctgttatttat
gctgcatttcttgctcttttttgtggtggccctcgcgttatcgttcgatctttgattgca
cagagctactctacacagagcaaagaggttcttatttatggcgcgggctccggtggtcga
caactcgcaatggcattgagaagtagtggggactatcgtgtaagagcttttattgacggc
gattcaacattgtgcaataccatgattttaggcttacctgttattgccattgaagatgcg
atgcccatcatcaataaatacgatgtttctcaagtcttactagctgtacctagtgctaaa
cgttcacgacgtaaagtcatccttgatgaacttgctaagttacctgtggaagtgcttact
gtccctgatatgacggatattgtctctggcaaagcaaaaatcgatgagctgaaagatgtt
gctattgaagatttacttggacgagatcctgttgctccacaacaagtgttgttagaagcg
aatatcaaagataaagttgtaatggttacaggagctggaggttctattggctctgagttg
tgtcgtcaaatcgtagagcagtctccgaaatctattattttatttgaattatctgaattt
ggtttatatcaaattgatcgtgaactaaatcaacttaaggttgaaaaagggttaacttgc
gacattgttcctttgttgggttcagttcagcgtcaacatcgtttagaaaccacgatgtct
tcttttaaagtccaaacggtatatcatgcagcagcatacaaacacgttccattagttgaa
tttaacgtaattgagggtgtgcgtaataatatttatgggacttattatactgcatgtgct
gcgattaaagccggtgttgaatcatttgtattgatctcaaccgacaaagctgttcgtccg
actaacgtaatgggcacaactaaacgaatggcagaacttggcctacaggctcttgctgat
caagaaaatgcaaaaccaaatggtacgcgattttgcatggtacgatttggtaatgttctg
ggctcttctggctcagttattcccgtattcaaaaagcaaattgcatctggtgggccagta
acggttactcacccggaaatcactcgtttcttcatgacgattccagaggcagcacagtta
gtcatccaagctggtgcaatggggaaaggtggggatgtgtttgttttggacatgggagag
tcagtaaaaattacagacttagcatgtaatctcattcaactatctggtctagaagtaaag
tctgaggctaatcctcatggtgatattgagattcaattctcaggacttcgacctggtgag
aaactttatgaagagttgcttattggcgacaatgtaaaacaaacagcgcatgagcgaatc
atgacggctcatgaggttcatttacctttacaagagtacgaactattgttgaacgatctc
gatttcgcctgccatagtatggatcacgagaacatccgcacattactattaaatgctcca
acaggttttaatcctacggatggtattggcgacttagtctggagtcataaccaattggag
ttaaatctggttgatactgagctagttgtaaatgaatag
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