Vibrio parahaemolyticus BB22OP: VPBB_A1136
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Entry
VPBB_A1136 CDS
T02409
Name
(GenBank) putative transcriptional regulator of pyridoxine metabolism
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
vpb
Vibrio parahaemolyticus BB22OP
Brite
KEGG Orthology (KO) [BR:
vpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpb03000
]
VPBB_A1136
Transcription factors [BR:
vpb03000
]
Prokaryotic type
Helix-turn-helix
GntR family
VPBB_A1136
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_36
HTH_24
HTH_11
Rrf2
LexA_DNA_bind
HTH_Crp_2
Fe_dep_repress
HTH_41
Motif
Other DBs
NCBI-ProteinID:
AGB12510
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Position
2:complement(1279120..1280556)
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AA seq
478 aa
AA seq
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MDGSNLSLIDVGDLCVKTGSGTRQQSVFFAIRDKIVRGLWPKNGKLPSTRKLAQELNLSR
NTVISAYEQLVAEGYLVSQRGSGFFVAVELPEQYLPEKLPTQAANPPPAPLDVNASFAPG
VPDLSLFPTALWQKYLNRHLSRTCLLGNQDIQGSWELRCALSDYLASSRSVNCTPSRIII
TSGAQQALCIATMATLTAGSRVLMEQPGYAQMRKLILFQQYQFEPLFVRQKVGFDIDSVT
QSTADALYITPSNQYPMGTTLNTEQRAQIIEWASNQEAWILEDDYDSEFQFAHRPYTSLQ
GLAAQMGRDERVLYIGSFSKVMFNGLRLGYLVVPESLVDKCLMVKDALSGDTPSHIQAAM
ADFISEGSLLRHIRKMRRVYKSKHEQVCFSIQHYFGDKVRVISQAAGLHVTLSWQQGIDE
NTWTQRAKKAGIVMRPVSFYEHPDFKARDWQGVVIGYGNVRLDNIDPLIKRLFELFDV
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggatggatccaatttgtcgttaatcgatgtgggtgatttgtgcgtaaaaacaggcagc
ggtacgcgccagcagtctgtattttttgcaataagggataagattgttcgagggctttgg
cccaagaacggcaagctaccgtcgactcgtaaactggcacaagagttgaaccttagccgc
aacacggttatttctgcctacgaacagttagttgctgaagggtacttggtcagccagcgt
ggttcaggcttttttgttgctgttgagttgccagaacaatacttgcctgaaaagttgcca
actcaagctgccaaccctccgccagcgccgttggatgtgaatgccagtttcgctcctggt
gtacccgatttatcgctttttccaaccgctttgtggcaaaaatatctcaatcgtcactta
tcccgtacgtgtctgctaggcaatcaagacattcaaggtagctgggagcttcgatgcgct
ttatcggattacttagcgtcgagccgttcagtgaactgcacgcctagtcgaatcatcatc
acgtcaggcgcgcagcaagcgttgtgtatcgccaccatggcaacattaacggcaggaagt
agagtgctcatggaacaaccgggttatgcgcagatgcgcaagttgatcctttttcagcaa
tatcaatttgaaccgttattcgtaagacaaaaagtgggttttgatattgattctgtcacg
caaagtactgcagatgcactctatatcacgccaagtaaccaatatccgatggggacgact
ttaaacactgagcagcgagcacaaatcattgagtgggcatcgaaccaagaggcttggatt
cttgaagatgactacgacagtgaattccaatttgcacatcgtccatacaccagtttgcaa
gggttagccgcacaaatgggccgagacgagcgagtgttatacatcggctcttttagtaaa
gtcatgtttaatggtttgaggcttggctatctcgttgtgcctgaatcgctggtcgataaa
tgtttgatggtgaaagacgcacttagtggtgacacaccaagtcatattcaagccgcaatg
gcggactttatctcagaaggaagcttgctgcgacatattcgtaaaatgaggcgagtgtac
aagtcgaagcacgaacaagtctgtttctctattcagcattattttggtgacaaagttcga
gttatcagccaagcggcggggctgcacgttacgttgagctggcaacaaggaattgatgaa
aacacgtggacgcaacgagccaaaaaggcgggcatcgtgatgcgcccagtcagtttttat
gagcatcccgattttaaagctcgagattggcagggcgtcgtgatcggatatgggaatgtt
cgtcttgacaacattgacccgttgattaaacgcctctttgagctatttgacgtctga
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