KEGG   Variovorax paradoxus B4: VAPA_1c06240
Entry
VAPA_1c06240      CDS       T02835                                 
Name
(GenBank) putative type VI secretion system effector, Hcp1 family
  KO
K11903  type VI secretion system secreted protein Hcp
Organism
vpd  Variovorax paradoxus B4
Pathway
vpd03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vpd00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    VAPA_1c06240
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vpd02044]
    VAPA_1c06240
Secretion system [BR:vpd02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   VAPA_1c06240
SSDB
Motif
Pfam: T6SS_HCP
Other DBs
NCBI-ProteinID: AGU47754
UniProt: T1X5Z2
LinkDB
Position
1:complement(690461..690943)
AA seq 160 aa
MAADMFLKLEGVDGESKDDSHKKEIDVLSWSWGASQSGTGHVGGGSGAGKVSVQDLSVTK
YVDASSHLLLLDCCNGQHIKKGTLVVRKAGATPLEYVKLTMEDIIVSNIHTGGSGGEDRL
TETITLNFSKFKYEYTPQKADGSGDGTKETGWDIAANKKV
NT seq 483 nt   +upstreamnt  +downstreamnt
atggctgcagacatgtttttgaagctcgaaggcgtcgacggtgaatccaaggacgattcg
cacaagaaggaaatcgacgttctctcctggagctggggtgccagccagtccggcaccggc
cacgtcggcggcggctcgggcgccggcaaggtgagcgtgcaggacctctcggtcaccaag
tatgtggatgcctcctcgcacctgctgctgctcgactgctgcaacggccagcacatcaag
aagggcacgctggtggtccgcaaggccggagccacgccgctcgagtacgtcaagctcacg
atggaagacatcatcgtcagcaacatccacaccggcggcagcggcggcgaagaccgcctg
accgaaaccatcacgctgaacttctcgaagttcaagtacgagtacacgccgcagaaggcc
gacggctccggcgacggcaccaaggaaaccggctgggacatcgccgccaacaagaaggtc
tga

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