Variovorax paradoxus B4: VAPA_1c18170
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Entry
VAPA_1c18170 CDS
T02835
Symbol
kdgD
Name
(GenBank) 5-dehydro-4-deoxyglucarate dehydratase KdgD
KO
K01707
5-dehydro-4-deoxyglucarate dehydratase [EC:
4.2.1.41
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00053
Ascorbate and aldarate metabolism
vpd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
VAPA_1c18170 (kdgD)
Enzymes [BR:
vpd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.41 5-dehydro-4-deoxyglucarate dehydratase
VAPA_1c18170 (kdgD)
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GFIT
Motif
Pfam:
DHDPS
Motif
Other DBs
NCBI-ProteinID:
AGU48925
UniProt:
T1X9S6
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All DBs
Position
1:1946399..1947310
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AA seq
303 aa
AA seq
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MNPQELKTIMGSGLLSFPLTDFDANGDFNKKGYEKRLEWLAPYGASALFAAGGTGEFFSL
TGDEYPGIIQTAVDTCRGVVPIIAGAGGPTRFAIQCAQAAEKAGAHGILLLPHYLTEAGQ
EGLAAHVEAVCKSVKFGVIVYNRATSRLKPDTLAGLAERNPNLVGFKDGVGDIEAMVAIY
QKMGDRFAYLGGLPTAEVYAAAYKAMGTPVYSSAVFNFIPKTAMDFYHAVANDDLPTQHR
LLKNFFMPYLDLRNRVPGYAVSIVKAGAKIVGHDAGPVRTPLTDLKPAEMEQLKALIDAL
GPQ
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgaaccctcaagaactcaaaaccatcatgggctccggcctgctctcgttcccgttgacc
gacttcgacgcgaacggcgacttcaacaagaagggctacgagaagcgtctcgagtggctc
gccccctacggcgcgagcgcgctgttcgcggctggcggcacgggtgagttcttctcgctg
accggcgacgagtaccccggcatcatccagaccgcggtcgacacctgccgcggcgtggtg
ccgatcattgccggcgccggcggccccacgcgctttgcgatccagtgcgcgcaggcggcc
gagaaggccggcgcgcacggcatcctgctgctgccgcactacctgaccgaagccggccag
gaaggcctggccgcgcacgtcgaagccgtgtgcaagagcgtgaagttcggcgtgatcgtc
tacaaccgcgccaccagccgcctcaagcccgacacgctggccggcctggccgagcgcaat
ccgaacctcgtcggcttcaaggacggcgtgggcgacatcgaagccatggtcgccatctac
cagaagatgggcgaccgcttcgcctacctgggcggcctgcccacggccgaggtctatgcc
gcggcctacaaggcgatgggcacgccggtgtattcgtcggcagtcttcaacttcatcccg
aagacggcgatggatttctatcacgcggtcgcgaacgacgacctgccgacgcagcaccgc
ctgctgaagaacttcttcatgccttatctcgacctgcgcaaccgcgtgccgggctatgcg
gtgagcatcgtcaaggctggtgccaagatcgtcggccacgacgccggccccgtgcgcacg
ccgctcactgacctgaagcccgccgagatggaacagctcaaggcgctgatcgacgcgctc
ggcccgcagtaa
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