Variovorax paradoxus B4: VAPA_1c18220
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Entry
VAPA_1c18220 CDS
T02835
Name
(GenBank) ABC transporter, substrate-binding protein
KO
K05845
osmoprotectant transport system substrate-binding protein
K05846
osmoprotectant transport system permease protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_1c18220
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c18220
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Osmoprotectant transporter
VAPA_1c18220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
AGU48930
UniProt:
T1X9T1
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All DBs
Position
1:complement(1951705..1953285)
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AA seq
526 aa
AA seq
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MSIHWPPMCLPHRRILRAALLLFAITWLGAAASAQPGEGTLRVGSKRFTESYILAELLAQ
TAAPHTASPPVVRQGLGNTAIVYEALRSGAIDLYAEYTGTIALEILKGSPADTREAMNAA
LAPLGLGVAIPLGFNDGYALAVRAADAERLGLRTLSDLAKHPELKLGLSNEFLGRADGWK
GLAARYGFTQTPTGLDHGLAYEAVAAKQIDAIDIYTTDAKIDHLGLRVLEDDKKYFPRYD
AVVLYRLDLPARLPKAWAALQALEGRLDEHAMIAMNARAELQSVPFDAIARDFLAGTGKG
AKAEAREPRRGFAAKLFGPDLWQLARQHLVLVAVSVGVAILIGVPLAILVFPHVRLRALV
LGFASLLQTVPSLALLAVLISMLGAIGALPALIALTLYSLLPIMRNTVTGLAEVPNGLRL
AGTALGMTPPQNLRLVLLPLALPTLLAGVRTATAIAIGTATIAAFIGAGGFGERIVTGLA
LNDRELLLAGALPAAALALLSEGIFELIELAMRRRRGTPPSSLPLA
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgtctatacactggcccccgatgtgcctgccccaccgccgcatcctgcgcgccgccttg
ttgttgttcgccattacctggctcggtgccgctgcgtcggcgcaacccggtgagggcacg
ctgcgtgtcggctccaagcgcttcaccgagtcgtacatccttgccgagctgctggcgcag
accgcggcgccgcacaccgcatcgccgccggtggtgcggcaggggctgggcaacacggcc
atcgtgtacgaggcgctgcggtcgggcgcgatcgacctctacgccgaatacaccggcacc
atcgcgctcgagatcctcaagggctcgccggccgatacgcgcgaggccatgaatgcggcg
ctggcgccgctgggcctgggtgtggccattccgctcggcttcaacgacggctatgcgctg
gccgtgcgggcggccgatgccgagcggctcggcctgcgcacgctgagcgatctcgcgaag
caccccgagctcaagctcggcctgtcgaacgagttcctcggccgtgccgatggctggaag
ggcctcgccgcgcgctacggcttcacgcagacgcccaccggcctcgaccacgggctggcc
tacgaagccgtggccgcgaagcagatcgacgccatcgacatctacaccaccgacgccaag
atcgaccatctcggcctgcgcgtgctggaggacgacaagaaatactttccgcgctacgac
gccgtggtgctctacaggctcgacctgccggcgcggctgcccaaggcctgggccgcgctg
caggcgctcgagggccgcctcgacgagcacgcgatgatcgcgatgaatgcgcgcgccgaa
ctgcagagcgtgcccttcgacgccatcgcgcgcgacttcctggccggcaccggcaagggc
gcaaaggccgaggcccgggaaccccggcgcggcttcgccgccaagctgttcggccccgac
ctctggcagctcgcgcgccagcacctggtgctggtggcggtatccgtcggtgttgcgatc
ctgatcggcgtgccgctcgcgatcctggtgtttccgcatgtgcggctgcgtgcgctggtg
ctcggcttcgcgagcctgctgcagaccgtgccttcgctcgcgctgctggccgtgctgatc
tccatgctcggagcgatcggcgcgttgcccgcgctgatcgcgctcacgctttactcgctg
ctgccgatcatgcgcaacaccgtgacgggcctcgccgaagtgccgaacggcctgcgcctg
gccggcaccgcccttggcatgacgccgccgcagaacctgcggctggtgctgctgccgctg
gcgctgcccacgctgctggcaggcgtgcgaacggccacggccatcgccatcggcaccgcc
accatcgcggccttcatcggtgcgggcggattcggcgagcgcatcgtgacgggactggcc
ctcaacgaccgcgagctgctgctggcgggcgcgctgccggccgcggcgctggcgctgctg
agcgaaggcatcttcgagctgatcgaactcgcgatgcgccgtcgccgaggcacaccgccg
agctcgctgccgctcgcctga
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