Variovorax paradoxus B4: VAPA_1c23650
Help
Entry
VAPA_1c23650 CDS
T02835
Symbol
pilW1
Name
(GenBank) type IV pilus biogenesis/stability protein PilW
KO
K02656
type IV pilus assembly protein PilF
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vpd02044
]
VAPA_1c23650 (pilW1)
02035 Bacterial motility proteins [BR:
vpd02035
]
VAPA_1c23650 (pilW1)
Secretion system [BR:
vpd02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
VAPA_1c23650 (pilW1)
Bacterial motility proteins [BR:
vpd02035
]
Pilus system
Pilus assembly proteins
VAPA_1c23650 (pilW1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_17
TPR_19
TPR_16
TPR_1
TPR_11
TPR_8
TPR_12
TPR_14
TPR_9
TPR_20
TPR_15
HemY_N
HrpB1_HrpK
CAV_VP3
Coatomer_E
TPR_10
Motif
Other DBs
NCBI-ProteinID:
AGU49467
UniProt:
T1X954
LinkDB
All DBs
Position
1:2526679..2527533
Genome browser
AA seq
284 aa
AA seq
DB search
MRMAFPMTTASAQRLMAAGFAGVAVAFLLAGCVNTRTTTTSLADTSSGKGAEMVTESDES
SRQRRARLRMELAAGYFEHGQTTVALDEIKQALVADPNYADAYNLRGLVYMRLEDAGMAE
DSFRRAIAINPRDPNVRHNYGWLLCQQNRYGDAAQQFTEALAVPSYTDRAKTLMTQGVCQ
LRAGQRAEAERSLMKAYEIDAGNPVVGFNLASLLVQREEWSRAQFYIRRVNNSPSASAET
LWLGIKIERRLNNREAVAQLGGQLQRRFPQSREAIAYERGNFND
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaggatggcctttccgatgacgaccgcgagcgcgcagcggctgatggctgcaggcttt
gccggcgtcgccgtggcgtttctgctcgcgggctgcgtcaacacccgaaccaccaccacc
agcctggccgacaccagctcgggcaagggcgccgagatggtgaccgaatccgacgaaagc
agccggcaacgccgcgcgcgcctgcgcatggagctcgccgccggctacttcgagcacggc
cagaccaccgtcgcgctcgacgagatcaagcaggcgctggttgccgaccccaactacgcg
gacgcctacaacctgcgcggcctggtctacatgcggctcgaggatgccgggatggcagaa
gacagcttccgccgcgccattgccatcaatccgcgcgatcccaacgtgcggcacaactac
ggctggctgctgtgccagcagaaccgctatggcgatgcggcccagcagttcaccgaggca
ctggcggtgccgagctacaccgaccgtgccaagacgctcatgacccagggcgtctgccag
ctcagggcgggccagcgtgccgaggcggagcgcagcctcatgaaggcctacgagatcgac
gccggaaatccggtggtcggattcaacctggcttcgctgctggtgcagcgcgaagagtgg
tcgcgtgcgcagttctacatccgccgcgtcaacaacagcccttcggccagcgccgagacg
ctctggctcggcatcaagatcgaacgacggctcaacaaccgcgaagcagtggcgcagttg
ggagggcagctgcagcggcgctttccgcagtcccgggaggcaatagcgtacgagcgcggg
aatttcaatgactga
DBGET
integrated database retrieval system
