Variovorax paradoxus B4: VAPA_1c37070
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Entry
VAPA_1c37070 CDS
T02835
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
VAPA_1c37070 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpd03400
]
VAPA_1c37070 (mutS)
DNA repair and recombination proteins [BR:
vpd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
VAPA_1c37070 (mutS)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_I
MutS_III
MutS_IV
MutS_II
Motif
Other DBs
NCBI-ProteinID:
AGU50789
UniProt:
T1XEN2
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Position
1:3922586..3925243
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AA seq
885 aa
AA seq
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MKMTTAQTSPSTSDLSGHTPMMAQYLGLKANHPDTLLFYRMGDFYELFWADAEKAARLLD
ITLTQRGQSAGQPVVMCGVPFHAVDTYLARLIKLGESVAICEQVGEVGASKGPVERKVVR
VVTPGTLTDSELLNDKSESLLLAVHAGTRNFCGLAWLSVTGAELRLAECPADALEAWIAR
IAPSELLYSAEVTPAFEQRLKAARSATPFTLSIRPAWQFDGGLGERKLSEQMGSNSLAAW
NAESLTNAHAAAAALLGYAEHTQGRALSHVQRLSVERDGDLIELPPTTRRNLELVQTLRG
EDSPTMFSLLDTCMTGMGSRLVKRWLLSPRRDRSEAQARLEAIAALQSTVLGGTAAPWRT
LREQLKNTSDVERIAARIALRQVRPRELLALRLALAKAEQLAPALPASGELLGRIIERLA
PPPGCADLLASAIKPDPSALVRDGGVIAIGHDAELDELRAISENCDDFLLKLEVSERERT
GISNLRVQFNRVHGFYIEVTQSALSKVPDNYRRRQTLKNAERFITPELKAFEDKALSAQD
RALAREKWLYEQLLDALQPSVPALTQLAGAIATLDALCALAERSHTLHWRAPSFVSHPCI
EIQQGRHPVVEARLAEKSSGGFIANDTQLGPQQRMQVITGPNMGGKSTYMRQVAIIVLLA
SIGSHVPAAACRLGPIDAIHTRIGAADDLANAQSTFMLEMTEAAQILHSATAQSLVLMDE
IGRGTSTFDGLALAAGIAAQLHDRSKAFTLFATHYFELTEFPATHHGAVNMHVSATEAGR
DIVFLHEMQPGPASKSYGIQVARLAGMPAAVVNHARQALEALESQHAQTRAQVDLFAPPP
AAETPMASAVESALAALDPDAMTPREALDALYALQKLNTRERSAA
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaatgacgactgcgcaaacctccccctcgaccagcgacctctccgggcacacgccc
atgatggcgcagtacctgggcctcaaggcgaaccatccggacaccctgctgttctaccgg
atgggcgatttctacgagctgttctgggccgacgccgaaaaggccgcccgcctgctcgac
atcacgctcacccagcgcggccagtcggccggccagccggtggtgatgtgcggggtgccc
ttccatgcggtcgatacctacctcgcgcggctcatcaagctgggcgaatcggtggccatc
tgcgagcaggtgggtgaagtcggtgccagcaaggggccggtcgaacgcaaggtggtgcgg
gtggtcacgcccggcacgctgaccgattcggaactgctcaacgacaagagcgaatcgctg
ctgctcgcggtgcatgcgggcacgcgcaatttctgcggcctggcgtggctcagcgtgacc
ggcgcggaactgcggttggccgaatgcccggccgacgcactcgaagcctggatcgcacgc
atcgcgccgagcgaactgctctacagcgccgaggtaacgccggccttcgagcagcgcctg
aaggccgcgcgttcggccacgcctttcacgctctcgatccggcccgcgtggcagttcgac
ggcggcctgggcgagcgcaagctcagcgagcagatgggcagcaacagccttgccgcctgg
aacgccgaatcgctcaccaacgcgcatgccgccgccgccgcgctgctgggctatgccgag
cacacgcagggccgcgcactctcgcacgtgcagcgcctttcggtggagcgcgacggcgac
ctgatcgaactgccgcccaccacgcggcgcaatctcgaactcgtgcagacattgcgcggc
gaagactcgcccacgatgttctcgctgctcgacacctgcatgacgggcatgggcagccgc
ctcgtgaagcgctggctgctctcgccgcggcgcgaccgcagcgaggcgcaggcccggctc
gaagccattgccgcgctccagtccacggtgctgggcggcacggctgcgccctggcgcacc
ctgcgcgagcagctcaagaacaccagcgacgtggaacgcattgcggcgcgcatcgcgctc
aggcaggtgcgcccgcgcgaactgctggcgctgcgcctcgcgctcgcgaaggccgagcag
ctggcgccggcgcttccggcgtccggcgagctgctgggccgcatcatcgagcggctcgcg
ccgccgccgggctgcgccgacctgctggcgagcgcgatcaagcccgacccgtcggcactg
gtgcgcgacggcggcgtgatcgccatcggccacgacgccgagctcgacgagctgcgcgcc
atcagcgagaactgcgacgacttcctgctgaagctcgaagtcagcgagcgcgagcgcacc
ggcatttccaacctgcgcgtgcagttcaaccgcgtgcacggcttctacatcgaggtgacg
caaagcgcgctctcgaaggtgcccgacaactaccgccgccgccagacgctgaagaatgcc
gagcgcttcatcacgcccgaactcaaggccttcgaggacaaggcactgagcgcgcaggac
cgcgcgctggctcgcgagaagtggctctacgagcaattgctcgatgcgctgcagccctcg
gtgcccgcgctcacgcagctggccggcgccattgccacgctcgacgcgctgtgcgcgctg
gccgagcgctcgcatacgctgcactggcgcgcgccgagcttcgtgtcgcacccctgcatc
gagatccagcagggccgccatccggtggtggaggcgcggctggccgaaaaatcgtcgggt
ggcttcatcgccaacgacacgcagctcgggccccagcagcgcatgcaggtgatcaccggc
cccaacatgggcggtaaatcgacctacatgcggcaggtggcgatcatcgtgctgctggcc
tccatcggctcgcacgtgcccgcggccgcctgccggctcgggcccatcgacgcgatccac
acccgcatcggcgccgcggacgacctggccaacgcgcagtcgaccttcatgctcgagatg
accgaggccgcgcagatcctgcacagcgccaccgcccagtcgctggtgctgatggacgaa
atcggccgcggcaccagcaccttcgacggcctggcgctggccgcgggcatcgcggcccag
ttgcacgaccgcagcaaggccttcacgctgtttgccacccactacttcgagctgaccgaa
ttcccggccacgcaccacggcgccgtgaacatgcacgtgagcgccaccgaagcgggccgc
gacatcgtgttcctgcacgaaatgcagcccggcccggccagcaagagctacggcatccag
gtggcgcggctcgcgggcatgcccgcggcggtggtcaaccatgcgcggcaggcgctcgag
gcgctggagtcgcagcacgcccagacacgcgcgcaggtcgacctgttcgccccgcccccg
gcggccgaaacgcccatggccagcgccgtagaatccgctctggccgcgctcgaccccgat
gcgatgacgccacgggaggcgctcgacgcgctctatgccttacaaaaactgaacacgcgt
gaacgcagtgccgcctga
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