Variovorax paradoxus B4: VAPA_1c41780
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Entry
VAPA_1c41780 CDS
T02835
Name
(GenBank) putative serine/threonine dehydratase
KO
K01754
threonine dehydratase [EC:
4.3.1.19
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00260
Glycine, serine and threonine metabolism
vpd00290
Valine, leucine and isoleucine biosynthesis
vpd01100
Metabolic pathways
vpd01110
Biosynthesis of secondary metabolites
vpd01200
Carbon metabolism
vpd01230
Biosynthesis of amino acids
Module
vpd_M00570
Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VAPA_1c41780
00290 Valine, leucine and isoleucine biosynthesis
VAPA_1c41780
Enzymes [BR:
vpd01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.19 threonine ammonia-lyase
VAPA_1c41780
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
Hydrolase
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
AGU51254
UniProt:
T1XFZ3
LinkDB
All DBs
Position
1:complement(4442244..4443206)
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AA seq
320 aa
AA seq
DB search
MNNENTHWRSETESASRRLRERAGGFLRQTPLWKLPSAAFGLAVPGVEVWLKLEHMQVSG
SFKARGMMNRLLANDIPESGVIVASGGNAGIATAAAAKALGVRCQVFLPGVSPEAKRARL
RALGAEVVVVGELYPDALAACLARQKETGALLTHAYDQPEVVAGAGTLGHEIEMQGGLPD
SVLVSVGGGGLIGGLAGWFEKRARVVALEPEKAPTLYRAREAGEPVDVDVGGIAADSLGA
RRIGAISWEITQKYVQDALLLSDESIRAAQQWLWKEMKLAVEPAAALPLAALQTGAYVPR
EGEKVCLIVCGANVDPATVA
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
ttgaacaacgaaaacacccattggcgctctgaaacagagagcgcctcccgcaggctgcgc
gaacgcgccggcggcttcctgcgccagaccccgctctggaagctgccgtccgcggccttc
ggtctggcggtgccgggcgtggaggtgtggctcaagctcgagcacatgcaggtgagcggc
agcttcaaggcccgcggcatgatgaaccgcctgctggccaacgacattcccgaaagcggc
gtgatcgtggcctcgggcggcaatgcgggcattgccaccgcggcggcggccaaggcgctg
ggcgtgcgctgccaggtgttcctgcccggcgtctcgcccgaagccaagcgcgcccgcctg
agggcgctcggcgccgaggtggtcgtggtcggcgaactctatcccgatgccctggcggcc
tgcctcgcgcgccagaaggaaaccggcgccttgctgacccatgcctacgaccagcccgaa
gtcgtggccggcgcaggcaccctcggccatgaaatcgagatgcagggcggcctccctgac
tccgtgctcgtgagcgtgggcggcggcggcctgatcggcggcctcgccggctggttcgaa
aagcgtgcccgcgtggtggcgctggagccggaaaaggcgcccaccctgtaccgtgcccgc
gaagccggcgagccggtcgatgtcgacgtgggcggcattgccgccgattcgctcggcgcg
cgccgcatcggcgccatttcctgggaaattacccagaaatatgtgcaggatgcgctgctg
ctgtccgacgaatccatccgcgcggcccagcaatggctgtggaaggaaatgaagctcgcc
gtcgagccggccgccgcgctgccgctggcggcgctgcagaccggtgcctacgtgccgcgc
gaaggcgagaaggtctgcctgatcgtctgcggggcgaacgtcgatccggccaccgtggcc
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